Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 8e-13 >seq19 Length=17744385 Score = 89.7 bits (98), Expect = 8e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || ||||| ||||| ||| | ||| || | | | Sbjct 2910349 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACTATCACTCTGGAGGCGGAGCCTAGT 2910290 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | ||| ||||| || ||||||||||| || || || || || Sbjct 2910289 GACACAATTGAAAATATCAAAGCTAAAATCCAGGATAAAGAAGGCATTCCTCCAGACCAG 2910230 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || ||||| |||||||| |||| || | || || || Sbjct 2910229 CAGCGTCTCATCTTTGCTGGCAAACAGCTAGAGGATGGTCGCACTCTCTCCGACTACAAC 2910170 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || || || || ||| | ||| | ||| | ||| | | ||||| Sbjct 2910169 ATCCAGAAGGAGTCCACTCTACATCTCGTTCTGCGTCTGAGGGGTGG 2910123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755176075222400