Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 100 6e-16 >seq4 Length=20010643 Score = 100 bits (110), Expect = 6e-16 Identities = 204/301 (68%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859 |||| || ||| || ||| | ||||||| ||||| || ||||||| || || || Sbjct 16961386 TACGACAGAGACTTCTCCTACAACTTCTTTGGCTTCAAGACTCTGGAGAGGTCCTACCTG 16961327 Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919 || || || | ||||| | | || || ||||||||| | ||||| ||| |||| Sbjct 16961326 CTGAAGATCAACGGCAAAGTGGCAGAGCGTCCCCAGCACATGCTCATGCGGGTGTCTGTT 16961267 Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAAC 248977 || || |||||| |||| || || || || | || |||| | || || ||| Sbjct 16961266 GGTATCCACAAGAATGATATCGACGCCGCCATCAATACCTACAACCTGCTGTCAGAGAAG 16961207 Query 248978 GCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGA 249037 ||| | || || || |||| |||||||||||||| || ||| | |||||| Sbjct 16961206 --TGGTTCACCCACGCGTCACCCACGCTCTTCAACGCAGGAACCAACCGGCCCCAGCTGT 16961149 Query 249038 GCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTA 249097 | ||||| || || |||||| | |||||| |||| ||||| ||||||||||| | Sbjct 16961148 CCAGCTGCTTCCTGCTGGCCATGAAGGACGACAGCATCGAAGGCATCTATGACACGCTGA 16961089 Query 249098 A 249098 | Sbjct 16961088 A 16961088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073358582514624