Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq14 82.4 5e-11 >seq14 Length=28847931 Score = 82.4 bits (90), Expect = 5e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| ||||| ||||| || ||||| |||| || |||||||| | || | |||||||| Sbjct 12556769 CATCTTCCAACTGTTTACCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATACCTTCTT 12556828 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 |||| || || ||||| | ||| ||||| |||||||| || | || | Sbjct 12556829 TATCCTGGATCTTGGCCTTGACATTTTCAATGGTATCACTGGGCTCCACTTCCAGAGTGA 12556888 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTC 44124 | || || || || | ||||||||||| |||||||| || Sbjct 12556889 TGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCATTTC 12556928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354649428055164