Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 6e-13 seq13 84.2 9e-11 >seq19 Length=17744385 Score = 91.5 bits (100), Expect = 6e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || || |||||||| || || |||||||| | ||||| |||||||| ||||| | Sbjct 6838552 ATGCCGTCATCACTGTTCCTGCATACTTCAATGACTCTCAACGCCAAGCAACCAAAGACG 6838493 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| || |||| | ||||| | ||||||||||||| || || |||||||| Sbjct 6838492 CTGGAACAATCTCTGGCCTTAATGTATTGAGAATTATTAATGAGCCCACTGCAGCTGCCA 6838433 Query 451440 TAGCATATGG 451449 | || ||||| Sbjct 6838432 TTGCCTATGG 6838423 >seq13 Length=21921923 Score = 84.2 bits (92), Expect = 9e-11 Identities = 110/150 (73%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 ||||||| || |||||||| || ||||||||||| | || || || ||||||||||||| Sbjct 10464390 ATGCAGTTATCACTGTTCCTGCCTATTTCAATGACTCCCAGCGCCAGGCAACTAAAGATG 10464449 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| ||| ||| | ||| |||| || || || ||||| || || || || || Sbjct 10464450 CTGGAACCATTAGTGGACTTAATATTCTCCGCATCATCAATGAGCCCACTGCTGCAGCCA 10464509 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAA 451469 | || || || || ||| || ||||| || Sbjct 10464510 TTGCTTACGGCCT-GGACAA--AAAAGTAA 10464536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974968020299444