Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq19 96.9 6e-15 >seq19 Length=17744385 Score = 96.9 bits (106), Expect = 6e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| || || | || | ||||||||| | ||| || || || || || Sbjct 2912610 ATTCCTCCTCTCAGACGGAGCACGAGATGTAAAGTGGACTCCTTCTGGATGTTGTAGTCG 2912669 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || ||||| || ||||||||||| || | |||||| ||||| ||| Sbjct 2912670 GACAGAGTGCGGCCATCTTCCAACTGCTTACCAGCAAAGATGAGTCTCTGCTGGTCTGGT 2912729 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| || || || || || || |||| ||| ||| || || | || Sbjct 2912730 GGGATTCCCTCCTTGTCCTGGATCTTGGACTTTATATTCTCTATCGTGTCACTGGGCTCA 2912789 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || |||||||| ||||| | ||||| | || |||||||| || Sbjct 2912790 ACCTCCAGGGTGATGGTTTTGCCAGTCAGGGTTTTCACAAACATCTGCATCTT 2912842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904800613169400