Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=34528841 Score = 122 bits (134), Expect = 7e-23 Identities = 130/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || |||||||| || || | ||||| |||||| || | ||| || ||||| Sbjct 17818379 AGATCAGTTTCAGGGTTGTCGCACTCGGTACACAGCACAAATTTTCTGATAAACCCATCC 17818438 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| |||||| ||||| | || ||||| |||||||||||| | || ||||||||| Sbjct 17818439 AGCATGTCCTGCAACTTGTTCGCCTCATGGGATCCGTTGACGATGTAACGGTCGTTTTTG 17818498 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 ||| | ||| || || ||||| || || || || || |||| ||||||| Sbjct 17818499 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCAAAAAACTTGGTCGGGT 17818550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412692451037999