Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 3e-13 >seq7 Length=13814722 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 ||||||||||| || || ||||| | |||| ||| || ||||| ||||| || || || Sbjct 4137979 TGGTGGTACTACATCTCCAAAGGAGTGGAATTCTTGGACACAGTTTTTTTTATCCTGCGG 4137920 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTA-CTTT 58503 || ||||| || || || ||||| || || || || ||||| | || ||||| | | || Sbjct 4137919 AAGAAGTTCAACCAAGTCAGCTTCCTCCATGTCTACCATCACTGCACGATGTTCATCCTT 4137860 Query 58504 AGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 || ||| | || ||||| ||| | ||||||| ||| Sbjct 4137859 TGG-TGGATTGGCATTAAGTGGGTACCAGGAGGACAG 4137824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903076452272480