Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3 154 2e-32 >seq3 Length=16251686 Score = 154 bits (170), Expect = 2e-32 Identities = 142/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | |||||| | ||||||||||||||| | ||||||||| |||||||| Sbjct 14874774 CTTGAGTCCCGTGATGTGGGCGATCATGTAGGTGAGCAGTGCGTAGCTGGCGATGTTGAA 14874833 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||| |||||||| | || | |||||||||||| || |||||||| || || Sbjct 14874834 GGGAACTCCCAGCCCCATGTCAGCTGAGCGCTGGTACAGCTGACAGGAGAGCTCGCCATC 14874893 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 |||||| ||||| || | | ||| || |||||||| |||||| |||||| || || Sbjct 14874894 ACACACGTAGAACTGACAGATGGCGTGACATGGCGGCAGGGCCATGAGGGGCAGATCTGC 14874953 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/173 (72%), Gaps = 7/173 (4%) Strand=Plus/Plus Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 |||| ||| |||||||||||||||||||| |||||||| || ||||||||||| | Sbjct 14876094 GTACTCGGCACCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCCAGGTCGCCTTCTTC 14876153 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 ||||| | ||| | | ||||| |||||| | | || || | |||||||||||| Sbjct 14876154 TCTGTCTGTGAAAC---CAAGCTTGTCCAGAAACGCACGAGATCCATTGGCGTCCCAGAT 14876210 Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCG-GATGAAC 147444 ||| ||||| | || ||||| || | || || || ||| | ||| ||| Sbjct 14876211 TTTCACCCCCTTCTCTGAAAGCTCTTTGGCGTTTGTTGATCCCTGTGATAAAC 14876263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583271795815200