Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq19 100 2e-16 >seq19 Length=17744385 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAAC----ATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 ||||| |||||||| || || | | |||||||||||||||||| | ||| ||| || Sbjct 3998746 ATGCAGATTTTTGTGAAGACCCTCACTCACTGGCAAGACCATTACCCTTGAAGTAGAGCC 3998805 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 | | || | ||| | || || ||||| ||||| |||||| | ||| ||| Sbjct 3998806 CAGTGACACCATTGAAAATGTAAAGGCTAAAATCCAGGACAAGGAAGGCATTCCCCCTGA 3998865 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 ||| || ||||| || | ||| || || || | |||||| | ||| || ||| || Sbjct 3998866 TCAGCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGTACTCTGTCCGACTA 3998925 Query 106436 CAACATACAAAAAGAATCTACACTACAT 106463 |||||| |||||||||||||| || ||| Sbjct 3998926 CAACATCCAAAAAGAATCTACGCTTCAT 3998953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402184248750944