Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 3e-15 >seq7 Length=13814722 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 77311 CCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATAAAGTCATCCTTGTTGAC 77370 |||||| |||| |||||| | || ||| |||||||||| ||| | || |||||||| Sbjct 13344055 CCAGACCACCTGCAGCTCAGAGTTCAGTCTCTCCAGCTTCACAAACTGGTCTTTGTTGAC 13343996 Query 77371 AACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGT 77430 || ||||| | |||| ||||||||||| |||||||||||| |||||||| || Sbjct 13343995 CACGTCTCCTCCAGACTTCAGCTTCCAGCCGTTCACCTTCCAGTTCTTCACCCACTTGGT 13343936 Query 77431 CACACC 77436 |||||| Sbjct 13343935 CACACC 13343930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397312409456215