Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cynoglossus_20semilaevis_20[refseq_20GCF_5F000523025.1_202014-01-28] 29,643 sequences; 470,199,494 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq19 140 3e-28 >seq19 Length=17744385 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| ||||| |||||| |||| ||||| || | ||| || Sbjct 2910349 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACTATCACTCTGGAGGCGGAGCCTAGT 2910290 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| || || ||||||||||| || || || || Sbjct 2910289 GACACAATTGAAAATATCAAAGCTAAAATCCAGGATAAAGAAGGCATTCCTCCAGACCAG 2910230 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || |||||||| | || || || || | ||||| |||||| Sbjct 2910229 CAGCGTCTCATCTTTGCTGGCAAACAGCTAGAGGATGGTCGCACTCTCTCCGACTACAAC 2910170 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || ||||| | ||| ||||| || ||||||| Sbjct 2910169 ATCCAGAAGGAGTCCACTCTACATCTCGTTCTGCGTCTGAGGGGTGG 2910123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434757246423360