Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq167 84.2 2e-11 >seq167 Length=124328 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || ||| | | || ||||| || ||| | || || | || Sbjct 25485 ATGGCTCTGCCCCCCTGCCACGCCCTCTGCCAGTTCTATGTTTGTGATGGAGAGCTGTCA 25544 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 || || | |||||| | |||| || ||||| || ||||| || ||||||||||| | Sbjct 25545 TGTCAGCTGTACCAGCGCTCGGCCGACATGGGTCTAGGGGTGCCTTTCAACATTGCCAGC 25604 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 ||||| ||||| || ||||| | || ||| ||||||||||||| Sbjct 25605 TATGCCCTTCTCACATACATGATCGCACATATTACAGGACTTAA 25648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399034067939220