Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq167 138 1e-27
>seq167
Length=124328
Score = 138 bits (152), Expect = 1e-27
Identities = 120/149 (81%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821
|| |||| |||||| || || |||| |||||||| |||||||| |||||||| || |||
Sbjct 25633 TGTGCGATCATGTATGTGAGAAGGGCATAGCTGGCAATGTTGAAAGGCACCCCTAGACCC 25574
Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881
||||| ||||||||||||||||||| || || ||||| || | || |||||||||
Sbjct 25573 ATGTCGGCCGAGCGCTGGTACAGCTGACATGACAGCTCTCCATCACAAACATAGAACTGG 25514
Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| ||| ||||||||| ||||| |||||
Sbjct 25513 CAGAGGGCGTGGCAGGGGGGCAGAGCCAT 25485
Score = 89.7 bits (98), Expect = 6e-13
Identities = 110/148 (74%), Gaps = 8/148 (5%)
Strand=Plus/Minus
Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099
|||| | || || |||||||||||||||||||| || || || || |||||||| |||
Sbjct 24091 GTACTCTGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCGAGGTCCCCCTCCTC 24032
Query 146100 CCT----GTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155
|| ||| ||||| | | | | |||||| | ||||| |||||||| |||||||
Sbjct 24031 TCTCTCTGTGA---AGCCCAGGCTGT-CTAGGAAGGCACGGGAGCCGTTGGCATCCCAGA 23976
Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATT 146183
|||| || ||| || | || ||||| ||
Sbjct 23975 TCTTTACTCCCTTCTCCGATAGCTCCTT 23948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589364901844640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |