Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq167 138 1e-27 >seq167 Length=124328 Score = 138 bits (152), Expect = 1e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || |||| |||||| || || |||| |||||||| |||||||| |||||||| || ||| Sbjct 25633 TGTGCGATCATGTATGTGAGAAGGGCATAGCTGGCAATGTTGAAAGGCACCCCTAGACCC 25574 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 ||||| ||||||||||||||||||| || || ||||| || | || ||||||||| Sbjct 25573 ATGTCGGCCGAGCGCTGGTACAGCTGACATGACAGCTCTCCATCACAAACATAGAACTGG 25514 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||| ||||||||| ||||| ||||| Sbjct 25513 CAGAGGGCGTGGCAGGGGGGCAGAGCCAT 25485 Score = 89.7 bits (98), Expect = 6e-13 Identities = 110/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || |||||||||||||||||||| || || || || |||||||| ||| Sbjct 24091 GTACTCTGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCGAGGTCCCCCTCCTC 24032 Query 146100 CCT----GTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 || ||| ||||| | | | | |||||| | ||||| |||||||| ||||||| Sbjct 24031 TCTCTCTGTGA---AGCCCAGGCTGT-CTAGGAAGGCACGGGAGCCGTTGGCATCCCAGA 23976 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATT 146183 |||| || ||| || | || ||||| || Sbjct 23975 TCTTTACTCCCTTCTCCGATAGCTCCTT 23948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589364901844640