Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq2204 109 7e-19
>seq2204
Length=153157
Score = 109 bits (120), Expect = 7e-19
Identities = 180/256 (70%), Gaps = 8/256 (3%)
Strand=Plus/Minus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| ||||||||||| | |||||| | || |||||| |||| || ||||
Sbjct 60611 GAACTTCTCAAAGTTCCAGGCTATGTCGTTTCTGCTCACTGGGCTCCAGATGATCAGCTT 60552
Query 83203 GGGGTCGCTCACGAGCGTGCTCATG--TCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGG 83260
|||||| ||| || | | | | |||||||| || || || ||| |||
Sbjct 60551 GGGGTCATTCATCAGGGA--TGAAGGCTCGTCGCTGGGGAATGGGAGCTTTTCTTTGAGG 60494
Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318
|| | || || ||||| || |||| | | ||||| || |||||| | |||| ||
Sbjct 60493 AACACAAACAGGGGATGGGCATCCTTCC--CATTGACGTCCACCTTCTCCAGGAGCTGAA 60436
Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378
| || ||||| |||||||| ||||||||||| | ||||||||| | | ||| || |||
Sbjct 60435 ACTTTGGCTCAAAGCCGTTTCCAGGACGGACATACTTCAGGGACAGGAGGATTTCTTCAT 60376
Query 83379 TCTGGGCGTTTTCCTG 83394
||| | ||| |||||
Sbjct 60375 TCTTGCAGTTCTCCTG 60360
Score = 84.2 bits (92), Expect = 3e-11
Identities = 107/144 (74%), Gaps = 10/144 (7%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || ||||||||||| || || | || || || || |||||| ||| |||
Sbjct 59950 CCTGATGGCCGAACTGGTTGCAGGGTACTCCCAGGACAACGAGCCCCTT-GCT----GGC 59896
Query 83451 G--CCGCT---GCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGA 83505
| ||||| | |||||||||||||| ||||| |||| |||||| | |||||||| ||
Sbjct 59895 GTACCGCTCGTGGAGCTCGTTCATCTGGGTGTAATCCCTGACCGTCGTGCCTCAGAGAGA 59836
Query 83506 CGCTACGTTCTCGATGAGCAAGAC 83529
||| || ||||| || || | |||
Sbjct 59835 CGCGACATTCTCAATAAGGACGAC 59812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608062317100640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |