Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq2879 98.7 7e-16
>seq2879
Length=316610
Score = 98.7 bits (108), Expect = 7e-16
Identities = 163/238 (68%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 91798 TCATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACA 91857
|||||||| ||| ||| ||||||||||| || | | |||| ||||| | | |
Sbjct 189148 TCATTTCCGCACCTTCACCTCCAAAGAGGACTGCAGCCTAATCACAGACACAGCTACCAA 189089
Query 91858 ACTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917
|| || | || |||||||||||||| || | || || |||||||| ||| | |||||
Sbjct 189088 GCTCGAGCGCAGCGGCTTCTACTGGGGCCCACTTGGAGTAGAGGAGGCCCATTGCATGCT 189029
Query 91918 GCGCAACTCGGCACTGGGCAGCT---TTCTCATTCGGGATAGCAGGCAAAAGGACGTCTT 91974
|||||| | | |||||||| | | || ||| | || |||||||||||
Sbjct 189028 CCGCAACGCCCCCCTGGGCAGTTNNNNNNNNNNNNGCGACAGCCGACAGAAGGACGTCTT 188969
Query 91975 GTTCACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032
|| || ||||| || ||| || ||||| ||||| ||| | || || ||||||
Sbjct 188968 CTTTACTCTGTCCTACCACGACAAGAAGGGACCGGTCAGCGTGCGCATCGACTACAAG 188911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355814566423948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |