Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq82826 105 1e-17 >seq82826 Length=583 Score = 105 bits (116), Expect = 1e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 ||||||| ||||||||||| ||||| |||||||| || || ||||| |||||||| | Sbjct 139 TGGTGGCGTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGCTCCTTTGCCGCCATCTTCT 198 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAG 125547 |||| ||||| ||||| || |||||||| ||||| ||| |||||| | || ||| Sbjct 199 GGCTGAAGAAACGCGGCCTGATGCCCGGCCTGACCTTCAGCAACGAGCTCATCAGCAGAG 258 Query 125548 ACGAGG 125553 |||||| Sbjct 259 ACGAGG 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740165149128160