Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1845 93.3 1e-13
>seq1845
Length=70248
Score = 93.3 bits (102), Expect = 1e-13
Identities = 116/157 (74%), Gaps = 4/157 (3%)
Strand=Plus/Plus
Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553
||||||||||| ||||| ||||| | || | ||| ||||| |||| || || ||| |
Sbjct 58115 TGGTGGTATTACATCTCCAAAGGTGTGGAGTTCCTGGATACAGTCTTTTTTATACTAAGG 58174
Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTA--CTT 78611
||||| || || ||| | || || || || || || ||||| | ||| ||||||| ||
Sbjct 58175 AAGAAGTTCAACCAAGTCAGCTTCCTCCACGTCTACCATCACTGTACCATGTTTATCCTC 58234
Query 78612 TGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648
||| ||||| ||||| || ||| || | || |||||
Sbjct 58235 TGG--TGGATCGGTATCAAGTGGGTCCCTGGTGGACA 58269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1149974567785328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |