Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq167 89.7 1e-12 >seq167 Length=124328 Score = 89.7 bits (98), Expect = 1e-12 Identities = 122/167 (73%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449 ||||||||||| || || | | || ||||| || ||||||| || || || ||| Sbjct 23939 ACAAATGCAAAGGAGCTATCGGAGAAGGGAGTAAAGATCTGGGATGCCAACGGCTCCCGT 23998 Query 111450 GACTTTCTAGATTCAGT-TGGTCTTGTC-GACAACGAAGAAGGTGATCTCGGACCAGTTT 111507 | ||| ||||| ||| ||| ||| | || | || || || || |||||||| || | Sbjct 23999 GCCTTCCTAGA--CAGCCTGGGCTTCACAGAGAGAGAGGAGGGGGACCTCGGACCTGTGT 24056 Query 111508 ACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 | || || || ||| | |||||||||||||| ||||||| ||||||| Sbjct 24057 ATGGGTTCCAGTGGAGGCACTTTGGTGCAGAGTACAAAAACATGCAC 24103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301741858275512