Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq6193 87.8 4e-12
seq5304 86.0 1e-11
>seq6193
Length=276178
Score = 87.8 bits (96), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106
|||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||
Sbjct 97616 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 97558
Query 142107 TCGACCCCCGCCAGAGA 142123
|||| |||| ||||||
Sbjct 97557 TCGAGTCCCGGCAGAGA 97541
>seq5304
Length=231475
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 160008 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 160067
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 160068 TCCCGGCAGAGA 160079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1026565765449956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |