Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq167 109 5e-19 >seq167 Length=124328 Score = 109 bits (120), Expect = 5e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 20235 TAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAG 20294 |||| || |||| ||| || | ||| || || | |||| ||||||||||||||| |||| Sbjct 25647 TAAGTCCTGTAATATGTGCGATCATGTATGTGAGAAGGGCATAGCTGGCAATGTTGAAAG 25588 Query 20295 GAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAG 20354 | || || | ||||||||| |||| | ||| ||||||||||| || ||||| || ||| Sbjct 25587 GCACCCCTAGACCCATGTCGGCCGAGCGCTGGTACAGCTGACATGACAGCTCTCCATCAC 25528 Query 20355 CTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 ||||| || || || | ||| ||||| || || ||||| Sbjct 25527 AAACATAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCAT 25485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440840305785440