Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq1328 100 4e-16 >seq1328 Length=146004 Score = 100 bits (110), Expect = 4e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 8966 CCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCT 9025 || |||||||||||||| ||||||||| ||||||||||||| ||| |||| | ||| Sbjct 129450 CCTCCGAAGGTGCTGGGCTTCCAGTACTCCGGGGAGCAGATTGGATTCCCCATCAAGCCT 129391 Query 9026 TTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGC 9085 || | ||| || ||||| |||| || | || |||| || |||||||| | || Sbjct 129390 TTGAGGGAGAAAGGAGCTCCCATTTCCACCATTGTCTCCCCAAAGATGGCGTTCTGTCGG 129331 Query 9086 GGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCT 9145 || ||||| || | | || | ||| || || || || || || |||||||| || | Sbjct 129330 GGCTTTTCCACCAGCAGCCCGGGGTAAAGCTCCACGGCATCAACATCGCCATACAGCTCC 129271 Query 9146 TCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 |||| ||| || || || || || ||| Sbjct 129270 TCCAGTATGGCGGCCATTTCTTTGTCTCCT 129241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722854858354400