Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4461 104 3e-17
>seq4461
Length=101207
Score = 104 bits (114), Expect = 3e-17
Identities = 177/252 (70%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||| |||| || |||||||||| || ||||| |||||| | |
Sbjct 13326 CCCGCAGCACATGCTCATGAGGGTGTCGGTCGGTATCCACGGAGAAGACATTGATGCCGC 13385
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| ||| || | |||| | || ||||| |||||| | ||||||||||
Sbjct 13386 CATTGAGACCTACAACCTGCTGTCGGAGAAGTG-GTTCACCCACGCCTCGCCAACCCTCT 13444
Query 111730 TCAACGCTGGTAC--ACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787
||||||| || || ||| | || || ||||||| || ||||| | || | |||||
Sbjct 13445 TCAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGA 13502
Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847
|| ||| | ||||| |||| ||| || | | || |||| || || || | ||
Sbjct 13503 TGACAGCATCGAGGGCATCTACGACACCCTGAAGCAGTGCGCCCTCATTTCCAAATCCGC 13562
Query 111848 TGGTGGTATCGG 111859
||| || |||||
Sbjct 13563 TGGCGGGATCGG 13574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 619993505331520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |