Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq525 89.7 6e-13
seq8880 82.4 9e-11
seq4859 82.4 9e-11
>seq525
Length=109705
Score = 89.7 bits (98), Expect = 6e-13
Identities = 59/64 (92%), Gaps = 1/64 (2%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT- 136775
||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||
Sbjct 79841 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTTGATCCCCGTA 79782
Query 136776 TGGG 136779
||||
Sbjct 79781 TGGG 79778
>seq8880
Length=69162
Score = 82.4 bits (90), Expect = 9e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
||||||||| | ||||| | || | |||||||||| || ||||| || ||||||||
Sbjct 9320 GTAGATGTTGCTTGTGTAAGCCTCTATGGACTCATTGTTACCCAGGATCTGGGCAGTGGA 9379
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
|||||||||||| || |||| ||||| |||||
Sbjct 9380 AGCTGTGGGCATCGGGGCCAAAAGAAGGCTGTT 9412
>seq4859
Length=382710
Score = 82.4 bits (90), Expect = 9e-11
Identities = 98/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 119515 CTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCT 119574
||||||||| |||||| ||||| |||| ||| || ||||| || ||||| ||||
Sbjct 368936 CTTCATCCCTGCTGATGAGTTCATTGGAGAAGGTAAGGCCGGGCATTAGGCCTCTCTTCT 368877
Query 119575 TTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAG 119634
||||||| |||||||| ||| || || |||||||| ||||| ||| || ||||
Sbjct 368876 TTAGCCAGTAGATGGCAGCAAATGAGCCTGAGAAGAAGATCCCCTCTACAGCTGCAAAAG 368817
Query 119635 CGAATAGACGCTC 119647
| | || |||||
Sbjct 368816 CCACCAGTCGCTC 368804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588265429904800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |