Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4461 122 1e-22
>seq4461
Length=101207
Score = 122 bits (134), Expect = 1e-22
Identities = 181/252 (72%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| ||| ||||| ||||| |||| | |||| |||||||| |||||||||||| | |
Sbjct 13326 CCCGCAGCACATGCTCATGAGGGTGTCGGTCGGTATCCACGGAGAAGACATTGATGCCGC 13385
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| ||| || | |||| | | || ||||| ||||| | ||||||||||
Sbjct 13386 CATTGAGACCTACAACCTGCTGTCGGAGAAGT-GGTTCACCCACGCCTCGCCAACCCTCT 13444
Query 75330 TCAATGCTGGTAC--ACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 75387
|||| || || || ||| | |||||| ||||||| |||||||| |||||| |||||
Sbjct 13445 TCAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGA 13502
Query 75388 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 75447
||| ||| | || ||||| | || || | | |||| || | || || || | ||
Sbjct 13503 TGACAGCATCGAGGGCATCTACGACACCCTGAAGCAGTGCGCCCTCATTTCCAAATCCGC 13562
Query 75448 TGGGGGTATTGG 75459
||| || || ||
Sbjct 13563 TGGCGGGATCGG 13574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595849868606080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |