Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5831 127 2e-24 >seq5831 Length=162632 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | |||||| |||||| Sbjct 77329 AGGTCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 77388 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| ||||| ||||| | || ||||| |||||||||||| | || ||||||||| Sbjct 77389 AGCATATCCTGCAACTTGTTCGCCTCATGGGATCCGTTGACGATGTAACGGTCGTTTTTG 77448 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 ||| | ||| || || || || || || || || || |||| ||||| Sbjct 77449 GTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGG 77498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412355979070388