Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq10680 98.7 2e-15 >seq10680 Length=108585 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 58371 TAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGT 58430 |||| |||| | |||||||| | || || ||||| || || ||| | || ||||| | Sbjct 28777 TAGCAGGAGCTCTCTGGTGGTATTTCATTTCCAAAGGCATTGAGTACCTGGACACAGTAT 28836 Query 58431 TTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTA 58490 ||||||| || ||||||||||| || || |||| ||| || ||||| || || || | | Sbjct 28837 TTTTCATTCTGAGGAAAAAGTTCAACCAGGTTACCTTCCTGCACGTCTACCACCACTGCA 28896 Query 58491 CTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||||| || | | ||| | || || || ||| | |||||||| || Sbjct 28897 CCATGTTCACGCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACA 28945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902321279557760