Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq9653 86.0 7e-12
>seq9653
Length=39613
Score = 86.0 bits (94), Expect = 7e-12
Identities = 233/353 (66%), Gaps = 13/353 (4%)
Strand=Plus/Minus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
||||| ||| | || || | |||| | ||| || || || |||||||| | || |
Sbjct 19136 GCCAGCTCTTTCGGTGATTTAAAGTCATCCACATGGATAAACGCGTCTCCTTGAACAAAG 19077
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065
|| || || |||| || | ||| || || || | ||||| | |||| |||||
Sbjct 19076 TTCTCATAGTTCTGCCTAGTTGTACCAAGAACCACTGGTACTG----TGCCCACAGAGAG 19021
Query 177066 CGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATA 177121
|| |||||||| || || || |||||| | || | ||||||||||| | | |||
Sbjct 19020 TGGGATGTAGAGTTTCTCAGTGATGTAGTCCTTATGGATTGAGTTCTCAAAGGACAAATA 18961
Query 177122 GAATTTACAGGAAG--ATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACT 177179
||| |||||| || |||||| || ||| | || | || | || || || || | |
Sbjct 18960 GAACTTACAGCTAGACATAGTA--GGAATGTAATCTTTGTCAGCGATGTATTCCCCAAAT 18903
Query 177180 ACGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTC 177239
| | || ||| |||| | || |||||||| | ||| ||| ||| || | |
Sbjct 18902 GCATGTCCATATGCATGAACCTCGATGTGTTTGTACAACTCATTGTAATATTTCACCCGC 18843
Query 177240 ACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC 177292
|| || || ||||| || || || | ||||||||| | ||| |||||||
Sbjct 18842 ACATGTTCTGGATTCCAGTTACTCACAATCCAGCAAACCAGTTTG-TCTTTGC 18791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577734150713600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |