Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4461 127 2e-24 >seq4461 Length=101207 Score = 127 bits (140), Expect = 2e-24 Identities = 196/280 (70%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 7529 TGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGG 7588 || |||| |||||||| || || || || || |||||||| || | ||| ||| Sbjct 13295 TGCTGAAGATCAACGGGAAAGTGGCCGAGCGCCCGCAGCACATGCTCATGAGGGTGTCGG 13354 Query 7589 TGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGA 7648 | || || ||||| ||||||||||| |||||| | || || ||| | || |||| || Sbjct 13355 TCGGTATCCACGGAGAAGACATTGATGCCGCCATTGAGACCTACAACCTGCTGTCGGAGA 13414 Query 7649 AACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGT 7708 | ||| || ||||| ||||| ||| | || ||| || || ||| ||| || ||| Sbjct 13415 AGTGGTTCACCCACGCCTCGCCAACCCTCTTCAACGCCGGGACCAACCGGCCGCAGCTGT 13474 Query 7709 CCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGC 7768 || || || |||| ||||| || ||||||||||| ||||| ||| |||| ||| Sbjct 13475 CCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATCTACGACACCCTGA 13534 Query 7769 GCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGG 7808 | |||||| |||||||||| || ||||| || || Sbjct 13535 AGCAGTGCGCCCTCATTTCCAAATCCGCTGGCGGGATCGG 13574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504788662100320