Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4461 127 2e-24
>seq4461
Length=101207
Score = 127 bits (140), Expect = 2e-24
Identities = 196/280 (70%), Gaps = 0/280 (0%)
Strand=Plus/Plus
Query 7529 TGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGG 7588
|| |||| |||||||| || || || || || |||||||| || | ||| |||
Sbjct 13295 TGCTGAAGATCAACGGGAAAGTGGCCGAGCGCCCGCAGCACATGCTCATGAGGGTGTCGG 13354
Query 7589 TGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGA 7648
| || || ||||| ||||||||||| |||||| | || || ||| | || |||| ||
Sbjct 13355 TCGGTATCCACGGAGAAGACATTGATGCCGCCATTGAGACCTACAACCTGCTGTCGGAGA 13414
Query 7649 AACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGT 7708
| ||| || ||||| ||||| ||| | || ||| || || ||| ||| || |||
Sbjct 13415 AGTGGTTCACCCACGCCTCGCCAACCCTCTTCAACGCCGGGACCAACCGGCCGCAGCTGT 13474
Query 7709 CCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGC 7768
|| || || |||| ||||| || ||||||||||| ||||| ||| |||| |||
Sbjct 13475 CCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATCTACGACACCCTGA 13534
Query 7769 GCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGG 7808
| |||||| |||||||||| || ||||| || ||
Sbjct 13535 AGCAGTGCGCCCTCATTTCCAAATCCGCTGGCGGGATCGG 13574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504788662100320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |