Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4461 109 6e-19
>seq4461
Length=101207
Score = 109 bits (120), Expect = 6e-19
Identities = 178/252 (71%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| ||| ||||| ||||| | ||| | ||||||| || || |||||||||||| | |
Sbjct 13326 CCCGCAGCACATGCTCATGAGGGTGTCGGTCGGTATCCACGGAGAAGACATTGATGCCGC 13385
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| ||| || | |||| | | || ||||| ||||| | ||||||||||
Sbjct 13386 CATTGAGACCTACAACCTGCTGTCGGAGAAGT-GGTTCACCCACGCCTCGCCAACCCTCT 13444
Query 104340 TCAATGCTGGTAC--ACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397
|||| || || || ||| | || || ||||||| |||||||| |||||| |||||
Sbjct 13445 TCAACGCCGGGACCAACC--GGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGA 13502
Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457
||| ||| | || ||||| | || || | | |||| || | || || || | ||
Sbjct 13503 TGACAGCATCGAGGGCATCTACGACACCCTGAAGCAGTGCGCCCTCATTTCCAAATCCGC 13562
Query 104458 TGGGGGTATTGG 104469
||| || || ||
Sbjct 13563 TGGCGGGATCGG 13574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582557125007840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |