Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_ 202014-11-13] 96,516 sequences; 1,011,849,000 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4461 131 2e-25 >seq4461 Length=101207 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 53210 GGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAA 53268 ||||||||||| || ||| | | || | | |||||| ||| || | || | || Sbjct 13357 GGTATCCACGGAGAAGACATTGATGCC-GCCATTGAGACCTACAACCTGCTGTCGGAGAA 13415 Query 53269 GTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTC 53328 || || || |||||| |||||||||| |||||||| || || || | || ||| |||| Sbjct 13416 GTGGTTCACCCACGCCTCGCCAACCCTCTTCAACGCCGGGACCAACCGGCCGCAGCTGTC 13475 Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388 |||||||||||| | || |||||||||||| ||||| ||||||||||| || || || Sbjct 13476 CAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGCATCTACGACACCCTGAA 13535 Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 | |||| |||| ||| ||||| | | || || ||||| Sbjct 13536 GCAGTGCGCCCTCATTTCCAAATCCGCTGGCGGGATCGG 13574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546555811256800