Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq167 131 1e-25
>seq167
Length=124328
Score = 131 bits (144), Expect = 1e-25
Identities = 120/152 (79%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279
|| || |||||||| ||||| || | |||||||| ||||| || || ||||| || |||
Sbjct 25633 TGTGCGATCATGTATGTGAGAAGGGCATAGCTGGCAATGTTGAAAGGCACCCCTAGACCC 25574
Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGA 27339
||||| |||| | |||||| |||||||| || ||||||||||| | || || |||||
Sbjct 25573 ATGTCGGCCGAGCGCTGGTACAGCTGACATGACAGCTCTCCATCACAAACATAGAACTGG 25514
Query 27340 CATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
|| | ||||||||| || || |||||||| ||
Sbjct 25513 CAGAGGGCGTGGCAGGGGGGCAGAGCCATAAG 25482
Score = 129 bits (142), Expect = 4e-25
Identities = 133/173 (77%), Gaps = 1/173 (1%)
Strand=Plus/Minus
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||||| |||||||||| || || |||||||| |||||||| ||||| ||||| |||||
Sbjct 24100 CATGTTTTTGTACTCTGCACCAAAGTGCCTCCACTGGAACCCATACACAGGTCCGAGGTC 24041
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
||||| || || | ||||||| |||| | ||| | | ||| |||||||| ||
Sbjct 24040 CCCCTCCTCTCTCTCTGTGAAGCCCAGGCTGTCTAGGAAGGCACGGGAGCCGTTGGCATC 23981
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTG 27660
|||||||||||| |||||||| || ||||| || | ||||| || |||| ||
Sbjct 23980 CCAGATCTTTACTCCCTTCTCCGATAGCTCCTTTGCATTTGTTGATCCCTGTG 23928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369072552837596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |