Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyprinodon_20nevadensis_20pectoralis_20[genbank_20GCA_5F000776015.1_
202014-11-13] 96,516 sequences; 1,011,849,000 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq4859 91.5 2e-13
seq5484 82.4 8e-11
>seq4859
Length=382710
Score = 91.5 bits (100), Expect = 2e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
|||||||||| || || | |||||| || || || | || ||||||| |||| || |
Sbjct 368936 CTTCATCCCTGCTGATGAGTTCATTGGAGAAGGTAAGGCCGGGCATTAGGCCTCTCTTCT 368877
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| | || ||||||||||| || || ||||| || ||||| ||||| ||||| |
Sbjct 368876 TTAGCCAGTAGATGGCAGCAAATGAGCCTGAGAAGAAGATCCCCTCTACAGCTGCAAAAG 368817
Query 23651 CCACAAGACG 23660
|||| || ||
Sbjct 368816 CCACCAGTCG 368807
>seq5484
Length=237921
Score = 82.4 bits (90), Expect = 8e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 139427 CAGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTG 139486
|||| ||||| |||||||| |||||||| ||||| | || ||| | | ||||||||||
Sbjct 32299 CAGGCGTCCTCCATACAAAGTTTTGGATCGTTGACATGAAGCATGTGTTCATTGGAAGTG 32358
Query 139487 CTAACATGGACTGGCGATCACTAACTCAAGTAAAA 139521
|||||||||||||| | | || || || || |||
Sbjct 32359 CTAACATGGACTGGAGGGCTCTTACACAGGTGAAA 32393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520858850802400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |