Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq197 98.7 1e-15 >seq197 Length=1194064 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| || |||||||| ||||| ||||| || || | || ||||| |||| |||| Sbjct 1112712 CTTCATCCCTGCTGATGAGTTCATTGGAGAAGGTAAGGCCGGGCATGAGGCCTCTCTTCT 1112653 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| |||| | || ||||||||||| || || ||||| || ||||| |||| |||||||| Sbjct 1112652 TTAGCCAGTAGATGGCAGCAAATGAGCCTGAGAAGAAGATCCCCTCTACAGCTGCAAAAG 1112593 Query 16344 CGATTAATCGTTCC 16357 | | | ||| ||| Sbjct 1112592 CCACCAGTCGCTCC 1112579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511355210175880