Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq351 82.4 7e-11 >seq351 Length=862037 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812 ||| ||| |||| || ||||| | ||||| || || | || || || | |||||| | Sbjct 703704 TTTATAGCCAAAAAACATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCT 703763 Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872 || | || ||| ||||||||||||| | ||||| ||||| || || || || Sbjct 703764 TGAGGTGGAGCCAAGCGACACCATCGAGAACGTCAAGGCTAAGATCCAGGATAAGGAGGG 703823 Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 26932 || || || || || || || || || | | ||||| || || ||||||| | | Sbjct 703824 CATCCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCAC 703883 Query 26933 CGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | | |||||| ||||| || || || || || |||| |||||||| Sbjct 703884 CCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCT 703931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478607000810480