Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq351 91.5 1e-13 >seq351 Length=862037 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23975 TTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCAT 24034 ||| |||||||| || ||||| | ||||| || || | || || || | || ||| | Sbjct 703704 TTTATAGCCAAAAAACATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCT 703763 Query 24035 CGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 24094 || || ||| | | ||||||||||||| | ||||| ||||| || || || || Sbjct 703764 TGAGGTGGAGCCAAGCGACACCATCGAGAACGTCAAGGCTAAGATCCAGGATAAGGAGGG 703823 Query 24095 CATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAA 24154 ||| || || || || ||||| ||||| | | |||||||| || ||||||| | | | Sbjct 703824 CATCCCCCCTGACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCAC 703883 Query 24155 CGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | ||| || ||||| || || || || || Sbjct 703884 CCTGTCCGACTACAACATCCAGAAGGAGTCCAC 703916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429887484275145