Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq656 468 1e-126 seq191 228 2e-54 seq639 188 1e-42 seq626 134 3e-26 seq583 120 6e-22 seq212 105 1e-17 seq54 105 1e-17 seq761 102 2e-16 seq258 102 2e-16 seq197 87.8 3e-12 >seq656 Length=490082 Score = 468 bits (518), Expect = 1e-126 Identities = 1061/1573 (67%), Gaps = 52/1573 (3%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||| ||||||||||| || |||| | |||| ||||| |||||||| ||||| || Sbjct 300712 CATCTCCTCGTTCCACAGCCCCCGCTCCGTCAGGTCCTTGAGAAGGTGAGGATTGACGAT 300653 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || || ||||| ||||| | ||| | ||| ||||||| ||||||| Sbjct 300652 CTGGAACTCTCCGGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 300593 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| ||||| ||||| || ||| ||| ||||||||||| |||| ||| || || Sbjct 300592 CTCGTTGTTGCCCAGGATCTGAGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCAGGCT 300533 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCC----GAAGCTCTGCCCAGTCCCATCTGC 213093 ||||||||| ||||| | | |||| | || | |||| ||||||||| || Sbjct 300532 GTTCCTCACGCCGTGTTTGGCGATCTT-CTCCTTCAGCAGCTT---CCAGTCCCACATGT 300477 Query 213094 CAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGG 213153 | ||| ||| ||| | ||||||||| |||| | |||||||||||| || | Sbjct 300476 C-----GGTGGGAGTC-TTCTC---CCACATGTCGTACTGGAGGATGCCTTTGCTGACAG 300426 Query 213154 GGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCA 213213 | ||| | ||| | ||| || || |||| ||||| |||||| |||| || Sbjct 300425 GTGAGCCTTCGTACGTCTCGTAAGGACCCAGCTCTGCCGCCAGTTCGCAGCTGGCCTCCA 300366 Query 213214 GGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACG 213273 |||| |||||||||||||| || || || | |||||||| | || |||||| Sbjct 300365 GGGCGGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGTTGAGCTTCTGGGCTTT 300306 Query 213274 TGAA-GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATG 213332 ||| ||| | | ||| | ||| | || |||| |||||||| ||||| |||||| Sbjct 300305 CGAACGGGTAACG-CATCAGGATGAAGGCGTCTGCCAAACCCTGGACTCCGATCCCGATG 300247 Query 213333 GGTCTGTGTCTCAGGTTAGACTTGGAGCACTC--CTCC----AAGGGGTAAAAGTTGCAG 213386 || | ||| | ||| | ||||| | ||| || | | |||||| ||||| Sbjct 300246 GGCCGGTGGC----GTTTG--TTGGACCTCTCTGCTTCGGGTACGGGGTAGTAGTTGATC 300193 Query 213387 TCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGA 213446 || ||||||||||| ||||| | ||| |||||||| |||||| | || Sbjct 300192 TCAATGATCTTGTTCAGGTTCTTCACGATCACCTTGGTGACCGAGGCCAGCTTCTTAAAG 300133 Query 213447 TTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAA 213506 | ||| || | | | | || || || ||||||||| ||||||||| || Sbjct 300132 TCGAAA--GTCCGCTCAGGCGTG-ACGTACATGTTGAGGGCGATGGAGGCCAGGTTACAG 300076 Query 213507 ACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGG 213566 || |||||||| | | |||||||||| |||||| ||||| ||||||||||| | Sbjct 300075 ACCGCCACCTCGTCCTTGCTGGTGTACTCCACGATCTCCGTGCAGAGGTTGCTGCACTTG 300016 Query 213567 ATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAG 213626 ||||||||||||||||| ||||| ||| |||| | |||||||| ||||||||| Sbjct 300015 ATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAAAGCATGTAG 299956 Query 213627 GGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACC 213686 || | |||||| || ||| ||| | | || | ||| | | | ||||| ||| Sbjct 299955 GGCGTCCCGGTTTCCGTCTGAGACTCGATGATGGCGTACCAAACCTGCTGAGCCTTCACC 299896 Query 213687 ACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGG 213746 ||| | | || |||| | | || || | |||||||| | || || | Sbjct 299895 ACCTTCTTCACC-CTCCCTTCCTTT--TCATATTTAGTGTAGAGCTTCTCAAACTCCTCC 299839 Query 213747 CCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCA 213806 |||||| | |||||| || ||||| ||||||||| ||| ||||||| || Sbjct 299838 CCCCAGCACTCGTCCAGCCCGGGACACTCGTTGGGACACATCAGGGACCAGTCCTGGTTG 299779 Query 213807 TCTCTG-ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGT 213865 |||| ||||||| |||||||||||| |||| ||||| ||| ||| ||||| |||| Sbjct 299778 -CTCTCCACTCTCTTCATGAACAGGTCAGGGATCCACATGGCGTAGAATAGGTCTCTGGC 299720 Query 213866 CCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTG 213925 ||| ||| ||| ||| | ||| || ||| || || ||||| || | || ||| Sbjct 299719 TCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACATCAAAGTG 299660 Query 213926 CCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAG 213982 ||||||||||| ||| ||||| ||||| |||| || | ||||| |||||||| || Sbjct 299659 CCACGGCTCCAGGTACATGGCGAAGGCTCCCGGTCGCTTGTTGCCACCCTGGTCAACATA 299600 Query 213983 CCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGT 214042 | ||| ||||| | | ||||| | || |||||||| ||||| | ||||| || Sbjct 299599 GCGGGCGGTGTTGTTGTAAACCCGCAGCATCGGGACCAGCCCATTGGAGTTGCCGTTAGT 299540 Query 214043 TCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGC 214102 || || || || || | | || | | ||||| | | || || || || || Sbjct 299539 GCCAGCGATGTAGCTCCCAGTCGATCTGATGCAGCTCACCGCCACGCCGATCCCGCCAGC 299480 Query 214103 GTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162 | | ||||| || | |||||| || ||| || || |||||| | ||||||||||| Sbjct 299479 GGATTTGGAAATGAGGGCGCACTGCTTCAGGGTGTCGTAGATGCCCTCGATGCTGTCATC 299420 Query 214163 TGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAG 214222 | | | |||| ||||||||| || ||||| | || | | || | |||||| || Sbjct 299419 CTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGCCCGGTTGGTCCCGGCGTTGAAGAG 299360 Query 214223 CGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGA 214282 || || ||| ||| | | |||| | || || || |||||||||| | | | | Sbjct 299359 GGTTGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTCTCAATGGCGGC 299300 Query 214283 GGGGATGTCGTGCTTGTGGATCTGTAGAGCG-CA-CCTCATCAGCATGTGCTGGGGCCTC 214340 | ||||| | ||||| | || || || |||||| ||||||||||| || | | Sbjct 299299 GTCAATGTCTTTTCCGTGGA--TACCGACCGACACCCTCATGAGCATGTGCTGCGGGCGC 299242 Query 214341 TCTATGGGTCCTTT---GGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCA 214397 || || |||| | | ||| ||||| |||||||||||||| || ||||| ||| Sbjct 299241 TC---GGCCACTTTCCCGTTGATCTTCAGCAGATAGGAGCGCTCCAGGGTTTTGAAGCCA 299185 Query 214398 AAGTAGGAGTAGG 214410 ||| || ||||| Sbjct 299184 AAGAAGTTGTAGG 299172 >seq191 Length=1248248 Score = 228 bits (252), Expect = 2e-54 Identities = 194/239 (81%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||||||||| || || |||| ||||||| ||||||||| |||||||||||||||| Sbjct 1021481 GCTGACAGCCGCTGCTCACGTGCGTTAGGACCTTCTGTTTGAGCTGGGCCACCTGGTCCC 1021422 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 |||| || ||||| || |||||||| || ||||||||| ||| || |||||||| |||| Sbjct 1021421 GCAGCACCGACGCTGTGTTGGACAGCCCCGCGTTGTCATTCTTCAGGACCTTCACCTTCT 1021362 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||||||| |||||||| ||||| ||||||| | ||| |||||||| |||| | || Sbjct 1021361 CCTCCAGCCGAGCGATGCGCTCCAGCTTGCGCCTCCTGCACTTGGTGGCGGCCAGCCTGT 1021302 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 |||| || | ||| || |||||||| ||||| ||||| ||||| |||||| || ||| Sbjct 1021301 TCCGCAGCCGCTTGCGCTCCGCCTTTATGCGCTCCTGCGTCTCCAGGTCGATGGGCGAC 1021243 Score = 111 bits (122), Expect = 3e-19 Identities = 93/115 (81%), Gaps = 8/115 (7%) Strand=Plus/Minus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| |||||||||| || ||||| || |||||||| ||||||| Sbjct 1021448 TCTGTTTGAGCTGGGCCACCTGGTCCCGCAGCACCGACGCTGTGTTGGACAGCCCCGCGT 1021389 Query 238986 TATCAGACTTGAGCA--------TTCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | ||| ||| || | |||||||||||||| |||||||| |||||||| Sbjct 1021388 TGTCATTCTTCAGGACCTTCACCTTCTCCTCCAGCCGAGCGATGCGCTCCAGCTT 1021334 >seq639 Length=503503 Score = 188 bits (208), Expect = 1e-42 Identities = 170/214 (79%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 || ||| | ||||||||| ||||||||||| |||| ||| | ||| || || || || || Sbjct 90230 CATGACTTTCTGTTTGAGCTGGGCCACCTGCTCCCTCAGCAGGGAGGCCGTGTTTGATAG 90171 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 ||||||||| || | ||| ||||||||||| || ||||||| ||| |||||||| ||||| Sbjct 90170 TCCTGCGTTATCCGTCTTCAGCACCTTCACCTTGTCCTCCAACCGGGCGATGCGCTCCAG 90111 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 |||||| | || || |||| || |||| ||||||| || | ||| || |||||||| Sbjct 90110 TTTGCGTCTCCGACACTTGGAAGCCGCCAGCCGGTTCCTCAGCCGCTTGCGCTCCGCCTT 90051 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||| || ||||||| |||||| | ||| |||||| Sbjct 90050 GATCCGCTCCTGGTTCTCCATATTGATGGGAGAC 90017 >seq626 Length=514994 Score = 134 bits (148), Expect = 3e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| || || || | || |||| ||| ||||| ||||||||||| |||| Sbjct 15633 GCTGGCAGCCGCTGCTCACATGGCTCATCACCTTCTGCTTGAGCTGGGCCACCTGCTCCC 15692 Query 241449 GCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCT 241508 ||| ||| || || || ||| | | ||| | | ||| || ||||| |||| Sbjct 15693 TCAGCACGCTGGCCGTGGAGGCCAGCTCGGTGTTCTGCGTCTTCAGGGTTTTCACCTTCT 15752 Query 241509 CCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGT 241568 |||||||||| | ||| || ||||| || | | |||||| |||| || || | | || Sbjct 15753 CCTCCAGCCGGGAGATCCGCTCCAGCTTCCTCTTGCGGCACTTGGACGCGGCGATCCTGT 15812 Query 241569 TCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 | || || |||| || |||||||||||||| ||||||| ||||||||||| |||||| Sbjct 15813 TGCGCAGCTTCTTGCGCTCCGCCTTGATGCGCTCCTGGTTGTCCATGTCGATGGGAGAC 15871 >seq583 Length=561488 Score = 120 bits (132), Expect = 6e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 241423 CTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTT 241482 ||| || || ||||||||||| |||||||| | | ||||| | ||| | | ||| Sbjct 497280 CTGCTTCAGCTGGGCCACCTGCTCCCGCAGCATGTTGGCGGTGGACGCCAGCTCCGAGTT 497221 Query 241483 GTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCG 241542 | ||||||||| |||||| ||||||||||||| | ||| || || ||||| | | Sbjct 497220 TTGGGACTTGAGCGTCTTCACCTTCTCCTCCAGCCTGGAGATCCGCTCAAGTTTCCTCTT 497161 Query 241543 GCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTC 241602 ||||| |||| ||||| | |||||||| | | ||| | |||||||| ||||| || Sbjct 497160 CCGGCACTTGGAAGCTGCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTAATGCGCTC 497101 Query 241603 CTGGTCCTCCATGTCGATCGGAGA 241626 |||| ||||||||||| || || Sbjct 497100 CTGGCTTTCCATGTCGATGGGGGA 497077 >seq212 Length=1146884 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| || || ||||||||||| || | ||| | | |||||| | || Sbjct 301520 AGGACCTTCTGCTTCAGCTGGGCCACCTGCTCTCTCAGCAGGCTCGCGGTCGAAGCCAAG 301579 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | | ||| ||| ||||||||| ||||||| || | ||| || |||||| Sbjct 301580 TCGGTGTTCTGGGTCTTCAGCGTCTTCACTTTATCCTCCAACCTGGAGATCCGCTCCAGT 301639 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 ||||||| | || || | ||| || | | ||| | || ||||| | || || ||| Sbjct 301640 TTGCGCCTCCTACACTTAGAGGCGGCAATCCTGTTTCTCAGCCTCTTCCTCTCGGCTTTG 301699 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| |||||||||| ||||||| Sbjct 301700 ATGCGCTCCTGCGTGTCCATGTCGACCGGAGAC 301732 >seq54 Length=1921180 Score = 105 bits (116), Expect = 1e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38960 CACCAGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGT 39019 |||||||||||| | |||||| ||||| |||||||| || | |||||| |||||||| | Sbjct 1827744 CACCAGCTCCCAGCGGTTGGCAGAGAACAGCAGGTGAACGGTGTGGTCCTCCAGCTCACT 1827803 Query 39020 CTTACTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTC 39070 ||| |||||||||| | |||||||| || |||||| | ||| | ||||| Sbjct 1827804 CTTCTTCTCCAGGTAAGCGCTGATCACCTGTCCGATCGCGGTGCTCCTGTC 1827854 >seq761 Length=414005 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| || |||||||||||||| | ||| | ||| ||||| | ||| ||| Sbjct 273599 CTGGAACTCTCCTGAGAGCACCCTGCGAGTGTAGATGTTGCTTGTGTAAGCCTCTATGGA 273658 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||| ||||| ||||| ||||| |||||| ||||||||||| || |||| || || || Sbjct 273659 CTCATTGTTACCCAGGATCTGGGCAGTGGAAGCTGTGGGCATCGGGGCCAAAAGAAGGCT 273718 Query 213038 GTTCCTCACTCCGTGC 213053 ||||||||| |||||| Sbjct 273719 GTTCCTCACACCGTGC 273734 Score = 87.8 bits (96), Expect = 3e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 213527 TGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTG 213586 ||| || || | || || |||||||| |||||| || |||||||||||| || || || Sbjct 275189 TGTATATTCTACTATTTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTG 275248 Query 213587 GTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 ||| | ||| |||| | |||||||||||||||||||| | || |||||| ||| Sbjct 275249 GTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTAGGGAGTACCCGTCTCTGTCTG 275308 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGC 213692 ||| | | || | ||| || | | |||||| ||||| ||| Sbjct 275309 CGACTCAATGATGGCGTACCACAGTTGCTGGGCCTTCACCACACGC 275354 >seq258 Length=1028905 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||| |||| || |||||||| | || | | || Sbjct 706598 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGGCCAGGCATCAGGCCGCGTTTCTTC 706657 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || || || ||||||||||||||||| ||||||||||| |||||||| Sbjct 706658 AGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCCACTGCGGCGAACGC 706716 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | |||||||||| ||||| |||| || || ||||| | || | | || Sbjct 692633 TCGTCTCTGCTGATGAGCTCGTTGCTGAAGGTCAGGCCGGGCATCAGGCCGCGTTTCTTC 692574 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || || || || ||||||||||||||||| |||||||| || |||||||| Sbjct 692573 AGCCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCCACGGCGGCGAACGC 692515 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 693361 CTGGTACTCTCCAACCCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 693302 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 693301 CATGAAGTCGAAGGGGTT 693284 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | |||||||||||||| ||||| ||||||| ||||||||||| Sbjct 705848 CTGGTACTCTCCAACGCGCTTCTCAAAGAAGTTGGTCTTTCCCTCCAGAGAGATGTTCTC 705907 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||||||| Sbjct 705908 CATGAAGTCGAAGGGGTT 705925 >seq197 Length=1194064 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 |||| |||| ||||||||| | ||||||||| || || ||||||| || |||| | Sbjct 1112712 CTTCATCCCTGCTGATGAGTTCATTGGAGAAGGTAAGGCCGGGCATGAGGCCTCTCTTCT 1112653 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 | |||||| | || || || || ||||| ||||||||||| ||||| || || || || | Sbjct 1112652 TTAGCCAGTAGATGGCAGCAAATGAGCCTGAGAAGAAGATCCCCTCTACAGCTGCAAAAG 1112593 Query 48273 C 48273 | Sbjct 1112592 C 1112592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931424986722560