Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq186 432 5e-116 seq5 190 3e-43 seq351 170 3e-37 seq1300 140 4e-28 seq1004 134 2e-26 >seq186 Length=1290931 Score = 432 bits (478), Expect = 5e-116 Identities = 1054/1581 (67%), Gaps = 17/1581 (1%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 ||||| |||||| | || || || ||||| |||||||| || | || ||| || Sbjct 651105 ATTGGCATCGATCTGGGCACCACCTACTCTTGTGTTGGGGTTTTCCAGCATGGAAAAGTG 651164 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || || | || || ||||| ||| | |||||||| || ||||||||||| || Sbjct 651165 GAAATCATTGCCAACGATCAAGGCAACAGGACAACTCCTAGCTATGTTGCCTTTACTGAC 651224 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | || | ||| |||||||||| || || || || || |||||||| | || ||| Sbjct 651225 ACAGAGAGACTCATTGGAGATGCTGCTAAGAACCAAGTTGCCATGAACCCCACAAACACT 651284 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTC---CAAGAC 195538 |||||||| || || || || ||||| | ||| ||| ||| | ||| ||| Sbjct 651285 GTCTTTGATGCCAAACGGCTCATTGGAAG-AAGATTT--GATGACCCAGTGGTTCAAAGT 651341 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || || |||| | | | ||| || || || || ||||| | | | Sbjct 651342 GACATGAAACTCTGGCCCT-TCAAGGTGGTCAA--TGACAATGGGAAGCCCAAAGTCCAG 651398 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGC-TCCCGAAGAAATTTCGTCTATGGTGTT 195657 || |||| | | || || || ||| | ||| ||| || || ||||| || ||||| | Sbjct 651399 GTGGAATATAAGGGAGA-AACAAAGACTTTCTGTCCTGAGGAGATTTCTTCAATGGTCCT 651457 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | |||| |||| || | || || | || |||| | | || |||| || | Sbjct 651458 GGTTAAAATGAGAGAAATAGCTGAGGCCTTTTTGGGACAGAGGGTATCGAATGCGGTCAT 651517 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || || |||||||| | ||||| || | || || |||||||| |||| | || Sbjct 651518 CACAGTTCCAGCTTACTTTAACGATTCCCAGAGGCAAGCCACAAAGGATGCTGGAGTAAT 651577 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 |||| ||||| ||| | || || ||||| || ||||| || || ||||| ||||| Sbjct 651578 CTCGGGACTAAATGTTCTGCGTATCATAAATGAGCCCACAGCAGCAGCCATTGCCTATGG 651637 Query 195838 TCTGGACAA-GAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||| || | || || || || ||||| | ||||||||||| ||||| || | Sbjct 651638 CCTGGATAAAGGTAAAAGAGGA-GAGCGCAATGTTCTCATCTTTGATCTAGGTGGAGGCA 651696 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | ||||| || ||| | || | ||||||| ||| ||||| || ||||| || || || | Sbjct 651697 CTTTTGACGTGTCAATCCTGACCATTGAAGATGGCATATTTGAGGTAAAAGCCACAGCAG 651756 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGAT 196015 | || || || || ||||| || || || || | | || || ||||| || Sbjct 651757 GGGACACACACCTCGGTGGGGAGGACTTTGACAACAGAATGGTCAACCACTTTGTG-GAG 651815 Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075 || ||| |||| | ||||| ||||| ||| || || | | | || Sbjct 651816 GAATTCAAAAGAAAACACAAGAAGGATATCAGCCAGAATAAGAGAGCAGTGAGGAGACTC 651875 Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAG 196135 | || || ||||| | || || |||| | || || | | || | | ||||| Sbjct 651876 CGCACGGCCTGTGAGAGAGCAAAGAGAACATTGTCCTCCAGCACCCAGGCTAGCATTGAG 651935 Query 196136 ATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAA 196195 ||||| || ||||||| || |||||||| || ||| | || || | ||||| ||||| Sbjct 651936 ATTGACTCACTGTTTGAGGGGATTGACTTTTACACATCAATCACAAGGGCACGCTTTGAG 651995 Query 196196 GAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT-CGTGA 196254 || |||||||||| | || ||| |||| ||||||||| |||| | | | || Sbjct 651996 GAACTAAACTCTGACCTCTTCAGGGGAACACTGGAGCCTGTTGAA-AAGTCCCTACAAGA 652054 Query 196255 CGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTAT 196314 || || ||||||| || ||| || ||||||||||| | || || || || || | || Sbjct 652055 TGCTAAACTGGATAAATCCAAGATTCATGAAATTGTCTTAGTTGGTGGTTCTACAAGAAT 652114 Query 196315 TCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGAT 196374 || || || || || | || ||||||||| || |||| | ||||| | || Sbjct 652115 CCCCAAAATCCAGAAGCTCCTACAGGATTTCTTCAATGGTAGAGATCTGAACAAGAGTAT 652174 Query 196375 CAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGT 196434 |||||| |||||||| || || || ||||| || || ||||||||||| || || | Sbjct 652175 CAACCCTGATGAAGCCGTAGCCTACGGTGCAGCAGTCCAGGCTGCTATCCTAATGGGGGA 652234 Query 196435 TGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCT 196494 | | || ||||||||| | ||||| || || || |||||| | || ||||| | Sbjct 652235 CACCTCAGAGAATGTCCAAGATTTACTGCTTCTGGACGTGGCACCCTTGTCTCTGGGCAT 652294 Query 196495 TGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAA 196554 ||| ||||| |||||||||||||| |||| | ||||||| || || || || || Sbjct 652295 TGAGACAGCTGGTGGTGTTATGACACCCCTTATCAAACGGAACACCACCATCCCCACCAA 652354 Query 196555 GAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614 || ||||| || || || || || || || || || || | || || || || Sbjct 652355 ACAGACTCAAGTGTTCAGCACCTACTCTGACAACCAGCCCGGGGTCCTGATCCAGGTCTA 652414 Query 196615 TGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674 |||||||| | || | ||||| ||| |||| ||||||| || || | || || Sbjct 652415 CGAAGGAGAGAGAGCCATGACCAAGGACAACAATCTCCTTGGAAAGTTTGAGCTCACAGG 652474 Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734 | || |||| ||||||||||| |||||||| | || ||| || ||||| || || Sbjct 652475 TCTCCCGCCTGCTCCCAGAGGTGTGCCACAGATAGAGGTCACCTTTGACATAGATGCCAA 652534 Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794 ||| || |||||||| | || | |||||| |||||||| | || || || Sbjct 652535 TGGTATCCTAAACGTGTCTGCAGTGGACAAAAGCACTGGCAAAGAAAACAAAATCACAAT 652594 Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854 ||||||||||||||| | || || || || |||||| ||||| |||||||| || Sbjct 652595 TACCAATGACAAGGGCAGACTCAGCAAAGATGAGATTGAAAAGATGGTGCAAGATGCTGA 652654 Query 196855 AAAGTACAGGGAAGAAGACGA 196875 ||||||| || ||| || || Sbjct 652655 CAAGTACAAGGCAGAGGATGA 652675 >seq5 Length=3291551 Score = 190 bits (210), Expect = 3e-43 Identities = 374/545 (69%), Gaps = 10/545 (2%) Strand=Plus/Minus Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 |||||| | ||||||||||| |||||||| || |||||||| || | | | ||||| Sbjct 169169 AAATGTTCTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCCATCTTGACAATTGA 169110 Query 195925 AGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTT 195984 || || || ||||| || || |||| || || || |||||| | |||||||||||||| Sbjct 169109 AGACGGCATCTTCGAGGTGAAATCTACGGCAGGCGACACTCATTTGGGTGGTGAAGATTT 169050 Query 195985 CGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATA 196043 || || | | || || ||| ||||||| || ||| | ||||| || | Sbjct 169049 TGACAACCGCATGGTGAACCACTTCATCT-CTGAGTTCAAACGCAAGTACAAGAAGGACA 168991 Query 196044 TTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA 196103 | || || ||||| | || || || | || || ||||| | ||||| || | Sbjct 168990 TCAGTGACAACAAGAGGGCAGTGCGGCGCCTGCGCACGGCCTGTGAGAGAGCCAAGCGTA 168931 Query 196104 CTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACT 196163 | || || || | |||| | | |||| ||||| || | | ||| || || || | Sbjct 168930 CCCTGTCCTCCAGCACTCAGGCCAGCATTGAAATTGACTCCCTATATGAGGGCATCGATT 168871 Query 196164 TCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG-GAAG 196222 | || || | || ||| | || || ||||| ||| | ||| | || ||||||| | | Sbjct 168870 TTTACACGTCCATCACCAGGGCTCGCTTTGAGGAGCTTAACGCAGACCTGTTTAGAGGAA 168811 Query 196223 TGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGAT 196282 | |||| ||||| ||| | | || || || || |||||||| ||| || |||| | Sbjct 168810 CG-CTGGAGCCTGTAGAAAAGGCTCTCCGAGATGCCAAGATGGACAAGGCTCAGGTCCAC 168752 Query 196283 GAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTT-TCTAG 196341 || || ||||| |||||||| ||||| |||||||| ||||| |||| |||| | || Sbjct 168751 GACATCGTCCTGGTGGGAGGGTCAACTCGTATTCCAAAGAT---CCAGAAGCTTCTGCAG 168695 Query 196342 --CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTAT 196399 |||||| ||| || || ||||||| | || ||||| ||||| ||||| || ||| Sbjct 168694 GACTTCTTTAATGGGAAGGAACTAAACAAGAGCATTAACCCTGATGAGGCAGTGGCCTAT 168635 Query 196400 GGTGC 196404 ||||| Sbjct 168634 GGTGC 168630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 195698 ACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCG 195757 ||||| | | |||| || ||||||||||| || ||||||| ||| || || || ||||| Sbjct 169820 ACTGTTACAAATGCTGTGGTGACTGTACCCGCCTACTTCAATGACTCCCAGCGCCAGGCT 169761 Query 195758 ACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAAC 195816 || || || |||| | || | || || || ||| || ||||||| ||||| || || Sbjct 169760 ACCAAAGATGCTGGGACCATCTCTGGGCTGAA-TGTCCTGCGAATTATTAATGAGCCCAC 169702 Query 195817 AGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 ||| ||||| || |||||||| || ||||| || Sbjct 169701 AGCTGCTGCCATCGCTTATGGCCTCGACAAAAA 169669 >seq351 Length=862037 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||| ||||| ||| | Sbjct 703720 ATGCAGATCTTTGTGAAGACCCTCACCGGTAAGACCATCACCCTTGAGGTGGAGCCAAGC 703779 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| || |||||||| ||||| || || || ||| Sbjct 703780 GACACCATCGAGAACGTCAAGGCTAAGATCCAGGATAAGGAGGGCATCCCCCCTGACCAG 703839 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 703840 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 703899 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || ||||||| Sbjct 703900 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTTCGTCTCAGGGGTGG 703946 Score = 122 bits (134), Expect = 1e-22 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || |||||||| ||||| || || |||||||| ||||| ||| | Sbjct 686548 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 686607 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || ||||| ||||||||||| ||||| || || || ||| Sbjct 686608 GACACCATTGAAAATGTGAAGGCTAAGATCCAAGATAAGGAGGGCATCCCCCCTGACCAG 686667 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCT 172028 || | || || || || || || ||||| |||||||| || ||||| Sbjct 686668 CAGAGGCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGCACCCT 686714 >seq1300 Length=188044 Score = 140 bits (154), Expect = 4e-28 Identities = 357/537 (66%), Gaps = 10/537 (2%) Strand=Plus/Plus Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932 |||||||||| ||||| || || || ||||| ||||| | |||| || |||| || | Sbjct 161330 TGATCTTTGACCTCGGCGGCGGCACCTTTGACGTCTCCATCCTCACCATCGAAGACGGCA 161389 Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCAC 195992 | || || || ||| | || ||||| || ||||| || || || ||||| ||||| | Sbjct 161390 TCTTTGAGGTCAAGTCCACGGCTGGCGACACTCACCTCGGAGGAGAAGACTTCGACAACC 161449 Query 195993 GTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA 196052 | | | ||||| || |||||| |||||| ||||||| || || | | Sbjct 161450 GCATGGTGAACCATTTCATTGCAGAGTTCAAGCGAAAGTATAAGAAGGACATCAGCGACA 161509 Query 196053 ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTT 196112 | ||||| | || || || | || || ||||| | || || || || || |||| Sbjct 161510 ACAAGAGGGCCGTCCGCCGCCTGCGCACCGCCTGTGAGAGGGCGAAGCGCACGCTGTCTT 161569 Query 196113 CTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAA 196172 | | | || | | | ||||| || || ||||||| || ||||||||||| || Sbjct 161570 CCAGCACCCAGGCCAGCATCGAGATCGACTCTCTGTTTGAGGGCATTGACTTCTACACCT 161629 Query 196173 CTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAG--GAAGTGTATGGA 196230 | || ||| | || || ||||||||| | || | || |||| | ||| | ||| Sbjct 161630 CCATCACCAGAGCTCGCTTTGAAGAGCTCAATGCCGACCTGTTCCGTGGAACCCT--GGA 161687 Query 196231 ACCTGTTGAACAAGTACTTC-GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTG 196289 || || || |||| | || ||||||| |||||||| || || | | || || | Sbjct 161688 CCCCGTGGAG-AAGTCCCTCCGTGACGCCAAGATGGACAAAGGCCAGATCCACGACATCG 161746 Query 196290 TCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTT 196347 | || || || || || ||||| || || ||||| || || |||| | || |||||| Sbjct 161747 TTCTGGTTGGCGGCTCCACCCGCATCCCCAAGATCCAGAAGCTGCT--CCAGGACTTCTT 161804 Query 196348 CAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 ||| || || | ||||| | ||||||||||| || || || || || || || Sbjct 161805 CAACGGAAAGGAGCTGAACAAGAGCATCAACCCGGACGAGGCGGTGGCGTACGGAGC 161861 >seq1004 Length=291928 Score = 134 bits (148), Expect = 2e-26 Identities = 361/544 (66%), Gaps = 10/544 (2%) Strand=Plus/Minus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||||| | |||||||| || || ||||| || |||||||||||| | || | |||||| Sbjct 43158 AATGTCCTCATCTTTGACCTTGGAGGTGGAACTTTTGATGTCTCAATCCTGACTATTGAG 43099 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||| || || || || ||||| || || || || || ||| | || || || || || Sbjct 43098 GATGGCATCTTTGAGGTCAAGGCCACAGCGGGGGACACACATTTGGGAGGGGAGGACTTT 43039 Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045 || || | | || || || |||||| || || || || || || Sbjct 43038 GACAACCGCATGGTTAACCACTTTATTGCAGAGTTCAAACGCAAATTCAAAAAGGACATC 42979 Query 196046 -TCTGGAA-ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA 196103 || || | | || || | ||||| || | || || ||||| || ||||| || | Sbjct 42978 ATCAACAACAAGCGAG--CTGTACGTCGTCTGCGTACAGCGTGTGAGCGAGCCAAGCGCA 42921 Query 196104 CTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACT 196163 | ||||| | | || | | |||||||||| || ||| ||| |||| || | Sbjct 42920 CCCTCTCCAGCAGCACCCAGGCCAGCATTGAGATTGACTCACTGTATGAGGGAACAGATT 42861 Query 196164 TCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTT--AGGAA 196221 |||| || | || ||| | || |||||||||||| | || | || |||| ||||| Sbjct 42860 TCTACACCTCAATCACCAGGGCTCGTTTTGAAGAGCTCAATGCAGACCTGTTCCGAGGAA 42801 Query 196222 GTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGA 196281 | || ||||| ||| | | || | || || ||||||||||| || | | Sbjct 42800 CCCTT--GAGCCTGTGGAAAAGGCCCTGAGGGATGCCAAGATGGATAAAGGCCAGATCCA 42743 Query 196282 TGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG 196341 ||| ||||| || ||||| || || || |||||||| ||||| ||| || | | | | || Sbjct 42742 TGATATTGTTCTAGTGGGTGGTTCCACACGTATTCCAAAGATCCAAAAGCTTC-TGCAAG 42684 Query 196342 -CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATG 196400 ||| || ||| | || |||||||| | ||||| || ||||| || |||||||| | Sbjct 42683 ACTTGTTTAATGGTCGTGACTTAAACAAGAGCATCAATCCTGATGAGGCCGTTGCTTACG 42624 Query 196401 GTGC 196404 | || Sbjct 42623 GGGC 42620 Score = 96.9 bits (106), Expect = 5e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 195699 CTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGA 195758 |||||| |||| || | || || || |||||||||||||| || || || || || | Sbjct 43410 CTGTGACCAATGCTGTCATCACAGTCCCAGCTTACTTCAGTGACTCTCAGCGTCAAGCCA 43351 Query 195759 CAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACA 195817 | ||||| || | | || | ||||| || ||| ||| |||| ||||||||||| ||| Sbjct 43350 CCAAGGATGCAGGAACCATCTCTGGTCTCAA-TGTGCTTCGAATCATCAATGAACCCACA 43292 Query 195818 GCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 || ||||| ||||| ||||| ||||||| || Sbjct 43291 GCTGCTGCCATTGCATATGGATTGGACAAAAA 43260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657786260650480