Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq404 127 2e-24 >seq404 Length=778216 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 || ||||| || ||||||||||| || ||||||| |||||| || | |||||| |||||| Sbjct 257185 AGGTCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 257126 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 |||| ||||| ||||| | || ||||| |||||||||||| | || ||||||||| Sbjct 257125 AGCATATCCTGCAACTTGTTCGCCTCATGGGATCCGTTGACGATGTAACGATCGTTTTTG 257066 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 ||| | ||| || || || || || || || || || |||| ||||| Sbjct 257065 GTATCAAACTGGGTCTGAGCACCGAGTTCACAACCAAAAAACTTGGTCGG 257016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412795013276687