Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq326 84.2 2e-11 >seq326 Length=899807 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | || ||||| | ||| | || || ||| ||| ||||| Sbjct 775273 AGTATATGGGGCCCAACATGTGATGGTCTGGATCGGATAGTGGAGCTGTGCACCCTGCCT 775214 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || |||||||||||||| | ||||| |||||||| || |||| | | | |||| Sbjct 775213 GACCTCCAGGTGGGCGACTGGCTGGTTTTTGAGAACATGGGTGCCTACACCGTAG-CAGC 775155 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGA 21276 || || |||||||| ||||||| || ||| || Sbjct 775154 ATCCTCCACCTTTAATGGCTTCCAAAGGCCTGA 775122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463491950391120