Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq563 84.2 3e-11 >seq563 Length=583708 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 |||||||||| |||||||||||| |||| || || || |||| |||||||| |||| Sbjct 209958 TCTACCAGGCCTCCACCAGTGAGCTGTACGGCAAAGTCCAGGAGATCCCACAGAAGGAAA 210017 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGG 161403 | ||||| || ||||||||||| || || || Sbjct 210018 CCACACCATTTTACCCACGATCGCCTTACGG 210048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729845119772920