Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq186 358 2e-93 seq1004 147 7e-30 seq5 145 2e-29 seq351 122 3e-22 seq212 93.3 1e-13 seq24 87.8 5e-12 >seq186 Length=1290931 Score = 358 bits (396), Expect = 2e-93 Identities = 763/1130 (68%), Gaps = 21/1130 (2%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || |||||| | || || || || |||||||||| |||| || ||| || Sbjct 651105 ATTGGCATCGATCTGGGCACCACCTACTCTTGTGTTGGGGTTTTCCAGCATGGAAAAGTG 651164 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 ||||| ||||| || |||||||| ||||| ||||| || || ||||| ||||| || Sbjct 651165 GAAATCATTGCCAACGATCAAGGCAACAGGACAACTCCTAGCTATGTTGCCTTTACTGAC 651224 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || ||| | | ||||| ||| |||| || || |||| ||| || || | ||| || Sbjct 651225 ACAGAGAGACTCATTGGAGATGCTGCTAAGAACCAAGTTGCCATGAACCCCACAAACACT 651284 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 || |||||||| || || || ||||| ||||| ||| |||| | ||| ||| Sbjct 651285 GTCTTTGATGCCAAACGGCTCATTGGAAGAAGATTTGATGACCCAGTGGTTCAAAGTGAC 651344 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | |||| | || || | || || || ||| || || || | | |||| Sbjct 651345 ATGAAACTCTGGCCCTTCAAGGTGGTC---AATGACAATGGGAAGCCCAAAGTCCAGGTG 651401 Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTTAGT 349560 |||||||| || ||| | ||| | ||| | || || || ||||| |||||||| | || Sbjct 651402 GAATATAAGGGAGAA-ACAAAGACTTTCTGTCCTGAGGAGATTTCTTCAATGGTCCTGGT 651460 Query 349561 TAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTAC 349620 |||||||| ||||| ||||| || | ||| || | | ||| | |||| || || || Sbjct 651461 TAAAATGAGAGAAATAGCTGAGGCCTTTTTGGGACAGAGGGTATCGAATGCGGTCATCAC 651520 Query 349621 TGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGC 349680 || ||||| || ||||| ||| ||||| | || ||||| |||||||| || | Sbjct 651521 AGTTCCAGCTTACTTTAACGATTCCCAGAGGCAAGCCACAAAGGATGCTGGAGTAATCTC 651580 Query 349681 GGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCT 349740 ||| |||||||||| | || || ||||| ||||| || ||||| ||||| ||||| || Sbjct 651581 GGGACTAAATGTTCTGCGTATCATAAATGAGCCCACAGCAGCAGCCATTGCCTATGGCCT 651640 Query 349741 TGATAAAA-TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 |||||| | | || | || ||| |||| || |||||| ||||||| || |||| Sbjct 651641 GGATAAAGGTAAAAGAGGA-GAGCGCAATGTTCTCATCTTTGATCTAGGTGGAGGCACTT 651699 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 |||| || ||| | || || ||||||| || || ||||| || ||||| || || || | Sbjct 651700 TTGACGTGTCAATCCTGACCATTGAAGATGGCATATTTGAGGTAAAAGCCACAGCAGGGG 651759 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAAT 349919 | ||||| || ||||| || || ||||| || | | || || ||||| | |||| Sbjct 651760 ACACACACCTCGGTGGGGAGGACTTTGACAACAGAATGGTCAACCACTTTGTGGAGGAAT 651819 Query 349920 TTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAA 349979 | || | || || | ||||| | | ||| |||||| || | | || | | Sbjct 651820 TCAAAAGAAAACACAAGAAGGATATCAGCCAGAATAAGAGAGCAGTGAGGAGACTCCGCA 651879 Query 349980 CTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTG 350039 | || ||||| | || ||| | | || || || | ||||| | ||||| |||| Sbjct 651880 CGGCCTGTGAGAGAGCAAAGAGAACATTGTCCTCCAGCACCCAGGCTAGCATTGAGATTG 651939 Query 350040 ATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAAT 350099 | || || ||| || | || || | |||| || ||| | || || ||||| ||| Sbjct 651940 ACTCACTGTTTGAGGGGATTGACTTTTACACATCAATCACAAGGGCACGCTTTGAGGAAC 651999 Query 350100 TATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAA 350159 || || || || || | |||| |||| ||||| ||||| || ||||||| | Sbjct 652000 TAAACTCTGACCTCTTCAGGGGAACACTGGAGCCTGTTGAAAAGTCCCTACAAGATGCTA 652059 Query 350160 AAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 || || | ||||| ||||| ||||| | || |||||||||||||||||| | || || Sbjct 652060 AACTGG--ATAAATCCAAGATTCATGAAATTGTCTTAGTTGGTGGTTCTACAAGAATCCC 652117 Query 350218 AAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA----- 350272 ||| | || || | ||| || || || ||||| | ||| ||| || || Sbjct 652118 CAAAATCCAGAAGCTCCTACAGGATTTCTTCAATGGTAGAGA----TCT-GAACAAGAGT 652172 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 || || || |||||||| || || || ||||| || || ||||| |||| Sbjct 652173 ATCAACCCTGATGAAGCCGTAGCCTACGGTGCAGCAGTCCAGGCTGCTAT 652222 Score = 152 bits (168), Expect = 2e-31 Identities = 367/551 (67%), Gaps = 12/551 (2%) Strand=Plus/Minus Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAAT-----TGAAC 183300 || ||||| || || |||||||| || || || |||||||| ||||| || || | Sbjct 652222 ATAGCAGCCTGGACTGCTGCACCGTAGGCTACGGCTTCATCAGGGTTGATACTCTTGTTC 652163 Query 183301 GAGATAATTCTTTGCCATTAAA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTA 183359 |||| || | ||||| || |||| ||| | | || | || |||| || ||||| Sbjct 652162 -AGAT----CTCTACCATTGAAGAAATCCTGTAGGAGCTTCTGGA-TTTTGGGGATTCTT 652109 Query 183360 GTTGAACCACCGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTT 183419 || |||||||| ||||| || | ||||| || || |||| | || | ||||| | Sbjct 652108 GTAGAACCACCAACTAAGACAATTTCATGAATCTTGGATTTATCCAGTTTAGCATCTTGT 652049 Query 183420 AAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAAT 183479 | ||||||||||| |||| ||| || || | || || || || || Sbjct 652048 AGGGACTTTTCAACAGGCTCCAGTGTTCCCCTGAAGAGGTCAGAGTTTAGTTCCTCAAAG 651989 Query 183480 CTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATC 183539 | ||| || || | |||| |||||||||| || | | | | || ||||| ||||| Sbjct 651988 CGTGCCCTTGTGATTGATGTGTAAAAGTCAATCCCCTCAAACAGTGAGTCAATCTCAATG 651929 Query 183540 GATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGA 183599 | || || || || |||||||| || |||| ||||| || || | |||| Sbjct 651928 CTAGCCTGGGTGCTGGAGGACAATGTTCTCTTTGCTCTCTCACAGGCCGTGCGGAGTCTC 651869 Query 183600 CGTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATA 183659 | | || ||| ||| | | ||||| | || ||||||||||| ||||| | | Sbjct 651868 CTCACTGCTCTCTTATTCTGGCTGATATCCTTCTTGTGTTTTCTTTTGAATTCCTCCACA 651809 Query 183660 AAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTA 183719 || || | | | ||| | ||||| || || ||||| | ||||| || || || || Sbjct 651808 AAGTGGTTGACCATTCTGTTGTCAAAGTCCTCCCCACCGAGGTGTGTGTCCCCTGCTGTG 651749 Query 183720 GCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCA 183779 ||||| || |||||||| || |||||||| | | ||||| || ||||| || || ||| Sbjct 651748 GCTTTTACCTCAAATATGCCATCTTCAATGGTCAGGATTGACACGTCAAAAGTGCCTCCA 651689 Query 183780 CCCAAATCAAA 183790 || | |||||| Sbjct 651688 CCTAGATCAAA 651678 >seq1004 Length=291928 Score = 147 bits (162), Expect = 7e-30 Identities = 362/544 (67%), Gaps = 10/544 (2%) Strand=Plus/Minus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | || || ||||| | || ||||| ||||||||||| ||| | || || |||| Sbjct 43158 AATGTCCTCATCTTTGACCTTGGAGGTGGAACTTTTGATGTCTCAATCCTGACTATTGAG 43099 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || || || ||||| || || || || || || || |||||| | || || || || ||| Sbjct 43098 GATGGCATCTTTGAGGTCAAGGCCACAGCGGGGGACACACATTTGGGAGGGGAGGACTTT 43039 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATT 349945 || || || | ||| || ||| || ||| || || || || |||| || || Sbjct 43038 GACAACCGCATGGTTAACCACTTTATTGCAGAGTTCAAACGCAAATTCAAAAAGGACATC 42979 Query 349946 GGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCC 350005 | || |||| | ||||| || | || |||||||| || || ||||| || Sbjct 42978 ATCAACAACAAGCGAGCTGTACGTCGTCTGCGTACAGCGTGTGAGCGAGCCAAGCGCACC 42919 Query 350006 TTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC 350065 | || | ||||| || ||||| ||||| || || ||| || | ||||||| Sbjct 42918 CTCTCCAGCAGCACCCAGGCCAGCATTGAGATTGACTCACTGTATGAGGGAACAGATTTC 42859 Query 350066 TTTTCATCTATTACACGTGCTCGGTTTGAAGAATT--ATGTATGGATCTTTTTAGAGCAA 350123 | | || || || | ||||| |||||||| | ||| | || || || ||| || Sbjct 42858 TACACCTCAATCACCAGGGCTCGTTTTGAAGAGCTCAATGCA--GACCTGTTCCGAGGAA 42801 Query 350124 CAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATG 350183 | | || ||||||||||| | | | ||||| || ||| ||| ||||| ||| Sbjct 42800 CCCTTGAGCCTGTGGAAAAGGCCCTGAGGGATGCCAAGATGGATAAAGGCCAGATCCATG 42741 Query 350184 AAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGT 350243 | | ||| |||| |||||||| |||||||||||||| | ||| || | || || | Sbjct 42740 ATATTGTTCTAGTGGGTGGTTCCACACGTATTCCAAAGATCCAAAAGCTTCTGCAAGACT 42681 Query 350244 TTTTTAATGGCAAAGAACCTT---CTAGATCAATTAATCCAGATGAAGCTGTTGCATATG 350300 | |||||||| || ||| | ||| | || ||||| ||||| || ||||| || | Sbjct 42680 TGTTTAATGGTCGTGA--CTTAAACAAGAGC-ATCAATCCTGATGAGGCCGTTGCTTACG 42624 Query 350301 GTGC 350304 | || Sbjct 42623 GGGC 42620 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 ||||| | ||| ||||||| || | ||||| | || || ||||| ||||| |||| | Sbjct 41077 ACATTAAGAATGCCATTAGCATCGATGTCAAAGGTCACCTCGATCTGGGGAACTCCTCTT 41136 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || |||||||| || || || ||||| ||||| ||||||||||||| || | Sbjct 41137 GGGGCAGGTGGAATGCCGGTCAATTCAAATTTTCCTAAGATATTATTATCTTTGGTCATG 41196 Query 183039 GCTCTCTCGCCTTCATATAC 183058 ||||| || |||||||| || Sbjct 41197 GCTCTTTCTCCTTCATAAAC 41216 Score = 84.2 bits (92), Expect = 7e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| || || || ||||| || || | ||| | |||||| || || || |||| Sbjct 43401 ATGCTGTCATCACAGTCCCAGCTTACTTCAGTGACTCTCAGCGTCAAGCCACCAAGGATG 43342 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 | || | ||| | || | ||||| || |||| || ||||||||||| ||||| || | Sbjct 43341 CAGGAACCATCTCTGGTCTCAATGTGCTTCGAATCATCAATGAACCCACAGCTGCTGCCA 43282 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||||||||| | || |||| Sbjct 43281 TTGCATATGGATTGGACAAAA 43261 >seq5 Length=3291551 Score = 145 bits (160), Expect = 2e-29 Identities = 363/544 (67%), Gaps = 8/544 (1%) Strand=Plus/Minus Query 349765 aaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGA 349824 |||| |||| || |||||| | |||||||| ||||||||||| || | | ||| |||| Sbjct 169169 AAATGTTCTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCCATCTTGACAATTGA 169110 Query 349825 AGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTT 349884 ||| || || || || || ||| | || || || || || ||| | ||||| |||||||| Sbjct 169109 AGACGGCATCTTCGAGGTGAAATCTACGGCAGGCGACACTCATTTGGGTGGTGAAGATTT 169050 Query 349885 TGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATA 349943 ||| || || | || || || | || || || || |||| || | || | Sbjct 169049 TGACAACCGCATGGTGAACCACTTCATCTCTGAGTTCAAACG-CAAGTACAAGAAGGACA 168991 Query 349944 TTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTT 350003 | | || || || ||| |||| ||||| | || || ||||| | || |||||| Sbjct 168990 TCAGTGACAACAAGAGGGCAGTGCGGCGCCTGCGCACGGCCTGTGAGAGAGCCAAGCGTA 168931 Query 350004 CCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATT 350063 || | || || | || || || ||||||||||| || || ||| |||| |||| Sbjct 168930 CCCTGTCCTCCAGCACTCAGGCCAGCATTGAAATTGACTCCCTATATGAGGGCATCGATT 168871 Query 350064 TCTTTTCATCTATTACACGTGCTCGGTTTGA--AGAATTATGTATGGATCTTTTTAGAGC 350121 | | | || || || | ||||| ||||| || | | | | || || ||||||| Sbjct 168870 TTTACACGTCCATCACCAGGGCTCGCTTTGAGGAGCTTAACGCA--GACCTGTTTAGAGG 168813 Query 350122 AACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGA 350181 ||| |||| ||||| ||||| | | |||||| || ||| ||| |||| | | Sbjct 168812 AACGCTGGAGCCTGTAGAAAAGGCTCTCCGAGATGCCAAGATGGACAAGGCTCAGGTCCA 168753 Query 350182 TGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGA 350241 || | || | || || || || || ||||||||||| | || || | || || Sbjct 168752 CGACATCGTCCTGGTGGGAGGGTCAACTCGTATTCCAAAGATCCAGAAGCTTCTGCAGGA 168693 Query 350242 GTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATG 350300 || |||||||| || |||| | ||| | ||||| || ||||| || || || |||| Sbjct 168692 CTTCTTTAATGGGAAGGAACTAAACAAGAGC-ATTAACCCTGATGAGGCAGTGGCCTATG 168634 Query 350301 GTGC 350304 |||| Sbjct 168633 GTGC 168630 Score = 122 bits (134), Expect = 3e-22 Identities = 351/533 (66%), Gaps = 8/533 (2%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA-TTCTTTGCCATTA 183320 |||||||||| || || || ||||| |||||||| | | | | | ||| || |||||| Sbjct 168628 CTGCACCATAGGCCACTGCCTCATCAGGGTTAAT-GCTCTTGTTTAGTTCCTTCCCATTA 168686 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || || | | || || |||||||| | |||||| || || || | || Sbjct 168687 AAGAAGTCCTGCAGAAGCTTCTGGATCTTTGGAATACGAGTTGACCCTCCCACCAGGACG 168746 Query 183381 ACTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 | || | || | | | || | | ||| | |||| | | | ||||| ||||| || Sbjct 168747 ATGTCGTGGACCTGAGCCTTGTCCATCTTG-GCATCTCGGAGAGCCTTTTCTACAGGCTC 168805 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 || ||| |||||| | ||| | ||| || || | || || || | || | Sbjct 168806 CAGCGTTCCTCTAAACAGGTCTGCGTTAAGCTCCTCAAAGCGAGCCCTGGTGATGGACGT 168865 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 |||| || || || | ||||| ||| ||||||||||| | || || || || Sbjct 168866 GTAAAAATCGATGCCCTCATATAGGGAGTCAATTTCAATGCTGGCCTGAGTGCTGGAGGA 168925 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGA--TCTTGGATTA 183617 | || | || |||| ||||| || || | || || || | || ||||| || Sbjct 168926 CAGGGTACGCTTGGCTCTCTCACAGGCCGTGCGCAGGCGCCGCACTGCCCTCTTG--TTG 168983 Query 183618 TCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTT 183677 || | || || | || | || | ||| || |||| || || || | | | | Sbjct 168984 TCACTGATGTCCTTCTTGTACTTGCGTTTGAACTCAGAGATGAAGTGGTTCACCATGCGG 169043 Query 183678 GTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATT 183737 | ||||||||||||||||| ||||| || ||||| || |||| ||| || || || || Sbjct 169044 TTGTCAAAATCTTCACCACCCAAATGAGTGTCGCCTGCCGTAGATTTCACCTCGAAGATG 169103 Query 183738 CCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 ||||||||||| | || || || |||||||| || |||||||| | |||||| Sbjct 169104 CCGTCTTCAATTGTCAAGATGGACACATCAAAAGTGCCACCACCAAGATCAAA 169156 Score = 102 bits (112), Expect = 2e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| | |||||||| ||||| || ||||| ||||||| || || ||||||| Sbjct 169810 ATGCTGTGGTGACTGTACCCGCCTACTTCAATGACTCCCAGCGCCAGGCTACCAAAGATG 169751 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||| | ||| | ||||| || |||| |||||||| ||||| ||||| || | Sbjct 169750 CTGGGACCATCTCTGGGCTGAATGTCCTGCGAATTATTAATGAGCCCACAGCTGCTGCCA 169691 Query 349728 TTGCATATGGGCTTGATAAAA 349748 | || ||||| || || |||| Sbjct 169690 TCGCTTATGGCCTCGACAAAA 169670 >seq351 Length=862037 Score = 122 bits (134), Expect = 3e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || || |||||| Sbjct 703931 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 703872 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| ||||| || || || || |||||| Sbjct 703871 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 703812 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || || || || || | || ||| || || ||||| || | ||| Sbjct 703811 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCGCTTGGCTCCACCTCAAGGGTGATGGTC 703752 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || ||||| |||||||| Sbjct 703751 TTACCGGTGAGGGTCTTCACAAAGATCTGCAT 703720 >seq212 Length=1146884 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 |||| || || || || || || | || |||||||| ||||| |||||||||||||||| Sbjct 457453 CTTTCTGGATGTTGTAGTCTGACAGCGTGCGCCCATCCTCAAGCTGTTTTCCAGCAAAGA 457512 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | ||||||||||||||||| ||||| ||| Sbjct 457513 TCAGACGTTGCTGATCAGGGGGAATACCT 457541 >seq24 Length=2470021 Score = 87.8 bits (96), Expect = 5e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 349250 AATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTT 349309 |||| ||||| || || || || ||||| || |||||| | | || || ||||| || Sbjct 1858262 AATGGACGTGTGGAGATCATCGCCAATGACCAGGGTAACCGCATTACTCCTTCATATGTG 1858203 Query 349310 GCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGC 349365 || || ||| || |||||| ||||||||||| ||||||| |||| ||||| | | Sbjct 1858202 GCCTTCACCAGCGAGGGCGAGCGTCTGATTGGTGATGCTGCAAAGAATC-AGCTGACCTC 1858144 Query 349366 TAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408 ||| || | || || || |||||||| ||| | || |||||| Sbjct 1858143 TAACCCCGAGAACACAGTCTTTGATGCCAAGAGGCTGATTGGT 1858101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515074643949977