Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq183 84.2 3e-11 >seq183 Length=1254102 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTG 13754 ||||| || || ||||| || |||||||| | ||||| |||||||| || | |||||| Sbjct 17866 TTTCCTATTGCGTACTCCATGGTGATCCATGAAAAGATTGAGATGTTTGAAAGACTCCTG 17925 Query 13755 AGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGA 13798 || | ||||| || || |||||||||||||| || || || || Sbjct 17926 CGGTCTATCTATGCTCCTCAGAACCTCTACTGTGTTCATGTTGA 17969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658662959171840