Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinodon_20variegatus_20[refseq_20GCF_5F000732505.1_202015-10-01] 9,259 sequences; 1,035,184,475 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq197 86.0 7e-12 >seq197 Length=1194064 Score = 86.0 bits (94), Expect = 7e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 |||||||||| || || | |||||| || || || | || ||||| | |||| || | Sbjct 1112712 CTTCATCCCTGCTGATGAGTTCATTGGAGAAGGTAAGGCCGGGCATGAGGCCTCTCTTCT 1112653 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| | || ||||||||||| || || ||||| || ||||| ||||| ||||| | Sbjct 1112652 TTAGCCAGTAGATGGCAGCAAATGAGCCTGAGAAGAAGATCCCCTCTACAGCTGCAAAAG 1112593 Query 23651 CCACAAGACG 23660 |||| || || Sbjct 1112592 CCACCAGTCG 1112583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521427644282600