Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq39 87.8 2e-12 >seq39 Length=16255708 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 104579 CTCCGAACCGTTTGTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAG 104638 |||| | ||| | ||| ||||||||||| || |||||||| || ||||||||||||| | Sbjct 10355599 CTCCCATCCGCTGGTACTCGCCTACTCGCTTCTCAAAAAAGTTGGTCTTGCCCTCCAAGG 10355658 Query 104639 AAATATTATTCATAAATTCGAAAGGATT 104666 ||||||| | ||| || || |||||||| Sbjct 10355659 AAATATTCTCCATGAAGTCAAAAGGATT 10355686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429886860733590