Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq445 109 5e-19 >seq445 Length=552131 Score = 109 bits (120), Expect = 5e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | ||| || || | |||||| || || ||||| ||||| ||||| || ||||| | Sbjct 60565 TGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTGGT 60506 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 ||||||| | |||||| || ||||||||||||||||| ||| ||||||||| ||| | Sbjct 60505 TACTTTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCAGTCTCTGTCTGAG 60446 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 60445 ACTCAATGAT 60436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471957468299520