Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq445 89.7 5e-13 >seq445 Length=552131 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 154624 TGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGAT 154683 |||| | |||||||||| |||||| ||||||||| ||||||||||||||| | ||| | Sbjct 60565 TGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTGGT 60506 Query 154684 TCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTC 154735 | |||| |||||| || || ||||| | ||||| || ||||| || || Sbjct 60505 TACTTTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCAGTCTC 60454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499586229138320