Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq19 96.9 1e-14 >seq19 Length=7320473 Score = 96.9 bits (106), Expect = 1e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||||| || ||||||| || ||||||||||||| |||| ||||||| || | Sbjct 1806333 TTGGTATTGATCTCGGGACCACCTACTCTTGTGTAGGTGTTTTCCAACATGGAAAAGTTG 1806274 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGATT 451037 |||| || || |||||||||||| || || ||||| | ||| ||| || |||| Sbjct 1806273 AAATCATTGCTAATGACCAAGGAAACCGGACCACTCCAAGCTATGTAGCTTTCACCGATT 1806214 Query 451038 CAGAAAGA 451045 | || ||| Sbjct 1806213 CTGAGAGA 1806206 Score = 87.8 bits (96), Expect = 7e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 |||| |||||||| || ||||||| || ||||||||||| | |||| ||||||| || | Sbjct 1718887 TTGGTATTGATCTCGGGACCACCTACTCCTGTGTAGGTGTCTTCCAACATGGAAAAGTTG 1718828 Query 450978 AAATTATAGCAAATGACCAAGGA 451000 |||| || || |||||||||||| Sbjct 1718827 AAATCATCGCTAATGACCAAGGA 1718805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975481006320824