Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq14 109 4e-19 >seq14 Length=18393167 Score = 109 bits (120), Expect = 4e-19 Identities = 114/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT-GCTCGAA 30075 || ||||||||||| || || ||||| || ||||| ||||| || || | | ||| || Sbjct 18375971 AAGTGCCTCCACTGAAAGCCATACACGGGACCCAGATCTCCTTCCTCACGATCGCTA-AA 18375913 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||||| |||| ||| || ||||| ||||| || ||||||||| | || |||||||| Sbjct 18375912 GCCGCTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGATCCTCACACCCTTCTC 18375853 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||| |||||| ||| || || || || Sbjct 18375852 GGACAGCTCTCTGGCATTGGTTGAACC 18375826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406116777830908