Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyprinus_20carpio_20[refseq_20GCF_5F000951615.1_202014-11-03] 9,378 sequences; 1,713,658,011 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq14 122 6e-23 >seq14 Length=18393167 Score = 122 bits (134), Expect = 6e-23 Identities = 130/169 (77%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| || ||||| || |||||||| || || || ||||| || ||||| || Sbjct 18375993 CATGTCTTTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACGGGACCCAGATC 18375934 Query 27549 TCCCTCTTCCCTGT-GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||| || || | | ||| ||||| ||||| |||| ||| || ||||| ||||| || | Sbjct 18375933 TCCTTCCTCACGATCGCTA-AAGCCGCTCTTATCCAGAAACTCCCTGGAGCCGTTAGCAT 18375875 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||||| | || ||||||||||| |||||| ||| || || || || Sbjct 18375874 CCCAGATCCTCACACCCTTCTCGGACAGCTCTCTGGCATTGGTTGAACC 18375826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369464967405518