Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danio_20rerio_20[refseq_20GCF_5F000002035.6_202017-05-09] 1,923 sequences; 1,679,203,469 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7 102 7e-17 >seq7 Length=74282399 Score = 102 bits (112), Expect = 7e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| |||| | |||| || || || ||||| |||| |||||||||||||| | ||| Sbjct 71539643 GATCTCCCTCTGATGGCGCTGCCGCCCTGTCATGCGTTGTGTCAGTTTTACGTGTCGAAC 71539702 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||||| || || || || | |||||| ||||||| || || || || || || || ||| Sbjct 71539703 GGTGAGTTGTCATGTCAGCTGTACCAGCGATCGGGAGACATCGGTCTCGGTGTCCCATTC 71539762 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 ||||| || | || || || || |||||||| | || || | || ||||| || Sbjct 71539763 AACATCGCCAGCTACGCCCTGCTGACCTACATGATCGCCCACATCACTGGACTCAA 71539818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399494636999535